RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SYN2Q92777 582 aaPredicted RBP14.51□□□□□ -0.09
CD44-224ENST00000526669 CASP10Q92851 521 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 PCDHB18PQ96TA0 734 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 ABCB6Q9NP58 842 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 DMAP1Q9NPF5 467 aaPredicted RBP14.51□□□□□ -0.09
CD44-224ENST00000526669 ARHGAP20Q9P2F6 1191 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 IMPACTQ9P2X3 320 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 CYTH4Q9UIA0 394 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 NUP210Q8TEM1 1887 aaPredicted RBP14.5□□□□□ -0.09
CD44-224ENST00000526669 TRIM66O15016 1216 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 ZMYND10O75800 440 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 EIF4A3P38919 411 aaKnown RBP14.5□□□□□ -0.09
CD44-224ENST00000526669 ALDH1A3P47895 512 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 TUFMP49411 452 aaKnown RBP14.5□□□□□ -0.09
CD44-224ENST00000526669 KCNC3Q14003 757 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 PKDCCQ504Y2 493 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 RARS2Q5T160 578 aaKnown RBP14.5□□□□□ -0.09
CD44-224ENST00000526669 VSTM1Q6UX27 236 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 CCDC186Q7Z3E2 898 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 ZNF677Q86XU0 584 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 DNAAF5Q86Y56 855 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 FMNL3Q8IVF7 1028 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 OLIG1Q8TAK6 271 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 CHP1Q99653 195 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.5□□□□□ -0.09
CD44-224ENST00000526669 ZNHIT6Q9NWK9 470 aaKnown RBP14.5□□□□□ -0.09
CD44-224ENST00000526669 PCDHGC3Q9UN70 934 aa14.5□□□□□ -0.09
CD44-224ENST00000526669 MAGED2Q9UNF1 606 aaPredicted RBP14.5□□□□□ -0.09
CD44-224ENST00000526669 TCF20Q9UGU0 1960 aaKnown RBP14.49□□□□□ -0.09
CD44-224ENST00000526669 TMCO5BA8MYB1 307 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 XPO1O14980 1071 aaKnown RBP14.49□□□□□ -0.09
CD44-224ENST00000526669 TBX10O75333 385 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 SETSIPP0DME0 302 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 HNRNPH3P31942 346 aaKnown RBP14.49□□□□□ -0.09
CD44-224ENST00000526669 RPL10AP62906 217 aaKnown RBP14.49□□□□□ -0.09
CD44-224ENST00000526669 DLX2Q07687 328 aaPredicted RBP14.49□□□□□ -0.09
CD44-224ENST00000526669 PLD1Q13393 1074 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 ADAM15Q13444 863 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 SKIV2LQ15477 1246 aaKnown RBP14.49□□□□□ -0.09
CD44-224ENST00000526669 CLUL1Q15846 466 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 NAA35Q5VZE5 725 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 TMC5Q6UXY8 1006 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 PIGZQ86VD9 579 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 CPA5Q8WXQ8 436 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 SYT11Q9BT88 431 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 PLEKHA4Q9H4M7 779 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 ST7Q9NRC1 585 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 TJP2Q9UDY2 1190 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 CDH22Q9UJ99 828 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 CEP83Q9Y592 693 aa14.49□□□□□ -0.09
CD44-224ENST00000526669 MYO10Q9HD67 2058 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 CCDC195A0A1B0GUA6 201 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 SLC38A8A6NNN8 435 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 HHLA1C9JL84 531 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.09
CD44-224ENST00000526669 LCP1P13796 627 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 GPD2P43304 727 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 SLC5A3P53794 718 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 EPHB3P54753 998 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 SLC8A3P57103 927 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 USP46P62068 366 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 NOMO3P69849 1222 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 MEA1Q16626 185 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 CLEC16AQ2KHT3 1053 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 C2CD6Q53TS8 623 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 SMYD5Q6GMV2 418 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 ANKRD54Q6NXT1 300 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 PMF1Q6P1K2 205 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 HS6ST3Q8IZP7 471 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 WDTC1Q8N5D0 677 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 SCAMP5Q8TAC9 235 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 SLC30A5Q8TAD4 765 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 C8orf48Q96LL4 319 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 PANX2Q96RD6 677 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 DEF6Q9H4E7 631 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 CSNK1G1Q9HCP0 422 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 DZANK1Q9NVP4 752 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 HCFC1R1Q9NWW0 138 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 TAS2R14Q9NYV8 317 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 HSFX1Q9UBD0 423 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 MAFFQ9ULX9 164 aa14.48□□□□□ -0.09
CD44-224ENST00000526669 EYSQ5T1H1 3165 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 CYP1A1P04798 512 aaPredicted RBP14.47□□□□□ -0.09
CD44-224ENST00000526669 PTMAP06454 111 aaKnown RBP14.47□□□□□ -0.09
CD44-224ENST00000526669 SRGAP2BP0DMP2 458 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 PLA2G4AP47712 749 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 GSDMDP57764 484 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 ADIGQ0VDE8 80 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 PDCLQ13371 301 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 VEPH1Q14D04 833 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 TAF12Q16514 161 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 PTPN20Q4JDL3 420 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 SYCE2Q6PIF2 218 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 ELMSAN1Q6PJG2 1045 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 DENND5BQ6ZUT9 1274 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 ELMOD1Q8N336 334 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 TMEM35BQ8NCS4 154 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 HDAC7Q8WUI4 952 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 SLC35F5Q8WV83 523 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 SMG7Q92540 1137 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms