RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 COL4A2P08572 1712 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 RTN3O95197 1032 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 TCF3P15923 654 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 CD72P21854 359 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 CCNE1P24864 410 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 RAP1GAPP47736 663 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 MXI1P50539 228 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 KPNA1P52294 538 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 ANKRD40Q6AI12 368 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 FAM35AQ86V20 835 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 RALGPS2Q86X27 583 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 ZNF687Q8N1G0 1237 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 KIAA1958Q8N8K9 716 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 SMARCD1Q96GM5 515 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 COMMD8Q9NX08 183 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 GCNT4Q9P109 453 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 MIA3Q5JRA6 1907 aa19.6■□□□□ 0.73
TSPAN4-216ENST00000526055 NDST1P52848 882 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 UBE2HP62256 183 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 SPOPLQ6IQ16 392 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 MAMSTRQ6ZN01 415 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 GPIHBP1Q8IV16 184 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 NUP93Q8N1F7 819 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 FBXL13Q8NEE6 735 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 PDZD8Q8NEN9 1154 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 OVCA2Q8WZ82 227 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 ERCC4Q92889 916 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 CEP63Q96MT8 703 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 SLITRK1Q96PX8 696 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 FAM83CQ9BQN1 747 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 SMG9Q9H0W8 520 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 DMAP1Q9NPF5 467 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 MAN1B1Q9UKM7 699 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 FBXO4Q9UKT5 387 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 GREB1Q4ZG55 1949 aa19.59■□□□□ 0.73
TSPAN4-216ENST00000526055 CLDN5O00501 218 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 LRRN2O75325 713 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 CKMP06732 381 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 FZD5Q13467 585 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 PDGFRLQ15198 375 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 ITPRIPL2Q3MIP1 535 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 ZNF528Q3MIS6 628 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 CC2D1AQ6P1N0 951 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 PAQR9Q6ZVX9 377 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 ACOT1Q86TX2 421 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 PHOX2BQ99453 314 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 MED10Q9BTT4 135 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 NT5C1AQ9BXI3 368 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 SEMA4AQ9H3S1 761 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 APOBEC3GQ9HC16 384 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 METTL14Q9HCE5 456 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 TRPC7Q9HCX4 862 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 GKN1Q9NS71 199 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 FAM86C1Q9NVL1 165 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 RAB20Q9NX57 234 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 ARHGAP26Q9UNA1 814 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 CCL26Q9Y258 94 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 OBSL1O75147 1896 aa19.58■□□□□ 0.72
TSPAN4-216ENST00000526055 CFAP54Q96N23 3096 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 TICRRQ7Z2Z1 1910 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 BICDL2A1A5D9 508 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 ZNF840PA6NDX5 716 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 SPECC1L-ADORA2AF8WAN1 911 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 LAMTOR5O43504 91 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 GADD45BO75293 160 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 HDCP19113 662 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 YWHAQP27348 245 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 CTHP32929 405 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 PMS1P54277 932 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 CACNA2D1P54289 1103 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 USP46P62068 366 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 AMPD2Q01433 879 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 USP4Q13107 963 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 WDR44Q5JSH3 913 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 FILIP1Q7Z7B0 1213 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 FUKQ8N0W3 1084 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 ELMO3Q96BJ8 720 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 EEF2KMTQ96G04 330 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 CHRDQ9H2X0 955 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 MMRN2Q9H8L6 949 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 CSNK1G1Q9HCP0 422 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 TMEM30AQ9NV96 361 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 SPATA6Q9NWH7 488 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 IL37Q9NZH6 218 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 ARMCX3Q9UH62 379 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 NDRG2Q9UN36 371 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 COQ4Q9Y3A0 265 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 MYO15AQ9UKN7 3530 aa19.57■□□□□ 0.72
TSPAN4-216ENST00000526055 CILPO75339 1184 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 TAF10Q12962 218 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 RUNX3Q13761 415 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 MORC3Q14149 939 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 LRRC32Q14392 662 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 ZNF77Q15935 545 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 ZC3H14Q6PJT7 736 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 FRMD5Q7Z6J6 570 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 ARL14EPQ8N8R7 260 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 TRIML1Q8N9V2 468 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 ZFYVE19Q96K21 471 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 HNRNPABQ99729 332 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms