RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZFP28Q8NHY6 868 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 TEKT5Q96M29 485 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 SMAD5Q99717 465 aaKnown RBP5.23□□□□□ -1.57
USP48-211ENST00000526044 ZNF341Q9BYN7 854 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 SENP6Q9GZR1 1112 aaPredicted RBP5.23□□□□□ -1.57
USP48-211ENST00000526044 MANSC1Q9H8J5 431 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 HELLSQ9NRZ9 838 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 LANCL2Q9NS86 450 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 TMEM140Q9NV12 185 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 CEP72Q9P209 647 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 CNOT7Q9UIV1 285 aaKnown RBP5.23□□□□□ -1.57
USP48-211ENST00000526044 TUBD1Q9UJT1 453 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 MYH2Q9UKX2 1941 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 COL4A5P29400 1685 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 COL1A1P02452 1464 aaPredicted RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 ATRNL1Q5VV63 1379 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 GPR75-ASB3A0A0A6YYF3 556 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 GLTPD2A6NH11 291 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 RECQL4O94761 1208 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 DDNO94850 711 aaPredicted RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 ALOX15P16050 662 aaPredicted RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 MGAT1P26572 445 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 GUCY1A2P33402 732 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 SLC6A9P48067 706 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 GMPSP49915 693 aaPredicted RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 TOB2Q14106 344 aaPredicted RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 DLGAP5Q15398 846 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 RRP12Q5JTH9 1297 aaKnown RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 Q8N1X5 172 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 FBXO18Q8NFZ0 1043 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 OR2I1PQ8NGU4 316 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 SLC35B2Q8TB61 432 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 CACTINQ8WUQ7 758 aaKnown RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 CASKIN2Q8WXE0 1202 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 STON2Q8WXE9 905 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 TFAP2CQ92754 450 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 TEKT1Q969V4 418 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 PRMT6Q96LA8 375 aaPredicted RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 FAM227BQ96M60 508 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 SEC62Q99442 399 aaKnown RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 NDC1Q9BTX1 674 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 KCNH6Q9H252 994 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 TYW1Q9NV66 732 aaKnown RBP5.22□□□□□ -1.57
USP48-211ENST00000526044 SIK3Q9Y2K2 1263 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 DOCK2Q92608 1830 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 MROH7-TTC4A0A0A0MT08 1334 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 ZNF541Q9H0D2 1346 aa5.22□□□□□ -1.57
USP48-211ENST00000526044 RFX7Q2KHR2 1363 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 CXorf49A8MYA2 514 aaPredicted RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 TEX33O43247 280 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 GPAA1O43292 621 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 REC8O95072 547 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 SNUPNO95149 360 aaKnown RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 PEX11BO96011 259 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 RECQLP46063 649 aaPredicted RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 CLRN1P58418 232 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 ZNF280AP59817 542 aaPredicted RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 DYNLL1P63167 89 aaKnown RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 DGCR2P98153 550 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 ODF1Q14990 250 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 LSM12Q3MHD2 195 aaKnown RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 AFMIDQ63HM1 303 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 APOBEC3HQ6NTF7 200 aaKnown RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 MIGA2Q7L4E1 593 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 ADGRA1Q86SQ6 560 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 RHOT1Q8IXI2 618 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 MIGA1Q8NAN2 632 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 CCHCR1Q8TD31 782 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 ZNF384Q8TF68 577 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 HDAC10Q969S8 669 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 FAM193BQ96PV7 902 aaPredicted RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 STRBPQ96SI9 672 aaKnown RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 LDAHQ9H6V9 325 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 ARMT1Q9H993 441 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 MYOZ2Q9NPC6 264 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 AATFQ9NY61 560 aaKnown RBP eCLIP5.21□□□□□ -1.58
USP48-211ENST00000526044 EIF2B4Q9UI10 523 aaKnown RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 AJAP1Q9UKB5 411 aaPredicted RBP5.21□□□□□ -1.58
USP48-211ENST00000526044 SORCS3Q9UPU3 1222 aa5.21□□□□□ -1.58
USP48-211ENST00000526044 A0A0D9SFI3 127 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 GRXCR1A8MXD5 290 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 TRIM24O15164 1050 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 MBD4O95243 580 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 RAP2AP10114 183 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 EPS15P42566 896 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 BTDP43251 543 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 ADKP55263 362 aaKnown RBP5.2□□□□□ -1.58
USP48-211ENST00000526044 KIF23Q02241 960 aaPredicted RBP5.2□□□□□ -1.58
USP48-211ENST00000526044 TUBA3CQ13748 450 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 CSRP2Q16527 193 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 ATXN7L2Q5T6C5 722 aaPredicted RBP5.2□□□□□ -1.58
USP48-211ENST00000526044 OTUD7BQ6GQQ9 843 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 CDC42EP5Q6NZY7 148 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 TUBA3EQ6PEY2 450 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 CCDC129Q6ZRS4 1044 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 LCORLQ8N3X6 602 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 OR10H5Q8NGA6 315 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 COA7Q96BR5 231 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 CHMP4CQ96CF2 233 aa5.2□□□□□ -1.58
USP48-211ENST00000526044 DCLRE1CQ96SD1 692 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms