RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 LINC00205P59089 165 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 DEPDC1Q5TB30 811 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 IRF2BP2Q7Z5L9 587 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 MRPL10Q7Z7H8 261 aaKnown RBP5.18□□□□□ -1.58
CSDE1-210ENST00000525878 ZDHHC17Q8IUH5 632 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 SLC15A3Q8IY34 581 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 NANOGP1Q8N7R0 232 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 NRACQ8N912 160 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 PLBD2Q8NHP8 589 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 C16orf52Q8NHV5 167 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 OSCP1Q8WVF1 389 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 RSPRY1Q96DX4 576 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 HSPBAP1Q96EW2 488 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 VCPIP1Q96JH7 1222 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 CIPCQ9C0C6 399 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 SARS2Q9NP81 518 aaKnown RBP5.18□□□□□ -1.58
CSDE1-210ENST00000525878 ASIC5Q9NY37 505 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 MTMR4Q9NYA4 1195 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 ZNF580Q9UK33 172 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 LY6G6EA0A0G2JKS1 128 aa5.17□□□□□ -1.58
CSDE1-210ENST00000525878 ALDH2P05091 517 aa5.17□□□□□ -1.58
CSDE1-210ENST00000525878 MYCLP12524 364 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 ADORA2AP29274 412 aa5.17□□□□□ -1.58
CSDE1-210ENST00000525878 KCNJ5P48544 419 aa5.17□□□□□ -1.58
CSDE1-210ENST00000525878 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 BCDIN3DQ7Z5W3 292 aaKnown RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 CAND1Q86VP6 1230 aaKnown RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 GAS2L3Q86XJ1 694 aa5.17□□□□□ -1.58
CSDE1-210ENST00000525878 IZUMO1Q8IYV9 350 aa5.17□□□□□ -1.58
CSDE1-210ENST00000525878 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 NUP88Q99567 741 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 SMAD5Q99717 465 aaKnown RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 CCNL1Q9UK58 526 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-210ENST00000525878 TMX2Q9Y320 296 aa5.17□□□□□ -1.58
CSDE1-210ENST00000525878 IL33O95760 270 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 A1BGP04217 495 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 SNHG28P0DPA3 235 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 KCNA3P22001 575 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 E2F1Q01094 437 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 LRRC41Q15345 812 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 FAM187BQ17R55 369 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 LY6KQ17RY6 165 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 CCDC157Q569K6 752 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 ATAT1Q5SQI0 421 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 C10orf25Q5T742 122 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 RUSC1-AS1Q66K80 236 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 ADAMTS18Q8TE60 1221 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 HPS3Q969F9 1004 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 PRR25Q96S07 402 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 EBF3Q9H4W6 596 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 STXBP5LQ9Y2K9 1186 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 SNX14Q9Y5W7 946 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.16□□□□□ -1.589e-9■□□□□ 9.6
CSDE1-210ENST00000525878 CADPSQ9ULU8 1353 aa5.16□□□□□ -1.58
CSDE1-210ENST00000525878 BTBD19C9JJ37 291 aa5.15□□□□□ -1.59
CSDE1-210ENST00000525878 XRCC6P12956 609 aaKnown RBP eCLIP5.15□□□□□ -1.59
CSDE1-210ENST00000525878 TKTP29401 623 aaKnown RBP5.15□□□□□ -1.59
CSDE1-210ENST00000525878 ALDH5A1P51649 535 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-210ENST00000525878 ARFIP2P53365 341 aa5.15□□□□□ -1.59
CSDE1-210ENST00000525878 SATB1Q01826 763 aa5.15□□□□□ -1.59
CSDE1-210ENST00000525878 SHC4Q6S5L8 630 aa5.15□□□□□ -1.59
CSDE1-210ENST00000525878 SERPINA13PQ6UXR4 307 aa5.15□□□□□ -1.59
CSDE1-210ENST00000525878 SFTPA1Q8IWL2 248 aa5.15□□□□□ -1.59
CSDE1-210ENST00000525878 MTFMTQ96DP5 389 aaKnown RBP5.15□□□□□ -1.59
CSDE1-210ENST00000525878 FYTTD1Q96QD9 318 aaKnown RBP5.15□□□□□ -1.59
CSDE1-210ENST00000525878 CGRRF1Q99675 332 aa5.15□□□□□ -1.59
CSDE1-210ENST00000525878 LUC7L2Q9Y383 392 aaKnown RBP5.15□□□□□ -1.59
CSDE1-210ENST00000525878 A0A087WWL8 130 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 A0A088AWK7 358 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 MYMKA6NI61 221 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 H3BNC9 293 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 AP4M1O00189 453 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 VNN1O95497 513 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 FGAP02671 866 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 CBSLP0DN79 551 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 CCKARP32238 428 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 CBSP35520 551 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 PSG6Q00889 435 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 SRSF1Q07955 248 aaKnown RBP eCLIP5.14□□□□□ -1.59
CSDE1-210ENST00000525878 ZNF268Q14587 947 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-210ENST00000525878 RBMS2Q15434 407 aaKnown RBP5.14□□□□□ -1.59
CSDE1-210ENST00000525878 DPY19L3Q6ZPD9 716 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 PIP4P1Q86T03 277 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 PNISRQ8TF01 805 aaKnown RBP5.14□□□□□ -1.59
CSDE1-210ENST00000525878 CHMP4CQ96CF2 233 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 EFHD1Q9BUP0 239 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 DPCDQ9BVM2 203 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-210ENST00000525878 TRMT13Q9NUP7 481 aaKnown RBP5.14□□□□□ -1.59
CSDE1-210ENST00000525878 TFCP2L1Q9NZI6 479 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 AMFRQ9UKV5 643 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 LRP12Q9Y561 859 aa5.14□□□□□ -1.59
CSDE1-210ENST00000525878 DSCR3O14972 297 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 TMEM191BP0C7N4 346 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 PRF1P14222 555 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 VCAM1P19320 739 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 HOXD9P28356 352 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-210ENST00000525878 GPR162Q16538 588 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 TRIM71Q2Q1W2 868 aaKnown RBP5.13□□□□□ -1.59
CSDE1-210ENST00000525878 MGAT5BQ3V5L5 792 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms