RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 CACNA2D3Q8IZS8 1091 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 ZNF622Q969S3 477 aaKnown RBP eCLIP5.44□□□□□ -1.54
CD44-220ENST00000525688 C18orf8Q96DM3 657 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 LRIG1Q96JA1 1093 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 SLC46A1Q96NT5 459 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 DCLRE1CQ96SD1 692 aaKnown RBP5.44□□□□□ -1.54
CD44-220ENST00000525688 CFAP74Q9C0B2 1584 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 MYLK2Q9H1R3 596 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 RNPEPQ9H4A4 650 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 MYO5CQ9NQX4 1742 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 TBC1D23Q9NUY8 699 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 ZSCAN32Q9NX65 697 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 RGL1Q9NZL6 768 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 CTTNBP2NLQ9P2B4 639 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 CDYLQ9Y232 598 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 ATP11BQ9Y2G3 1177 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 NEU2Q9Y3R4 380 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 DGKBQ9Y6T7 804 aa5.44□□□□□ -1.54
CD44-220ENST00000525688 DENND4BO75064 1496 aaPredicted RBP5.44□□□□□ -1.54
CD44-220ENST00000525688 EHBP1L1Q8N3D4 1523 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 GPATCH8Q9UKJ3 1502 aaKnown RBP5.43□□□□□ -1.54
CD44-220ENST00000525688 TIAM1Q13009 1591 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 CCDC195A0A1B0GUA6 201 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 FAM234BA2RU67 622 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 OTOL1A6NHN0 477 aaPredicted RBP5.43□□□□□ -1.54
CD44-220ENST00000525688 CAPN14A8MX76 684 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 SYT5O00445 386 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 BMP7P18075 431 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 COMTP21964 271 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 CCT5P48643 541 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 CPT1AP50416 773 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 RENBPP51606 427 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 PTK2BQ14289 1009 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 RAB30Q15771 203 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 PLA1AQ53H76 456 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 WDR45BQ5MNZ6 344 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 RRAGBQ5VZM2 374 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 ARMC3Q5W041 872 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 TSHZ3Q63HK5 1081 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 ARL6IP4Q66PJ3 421 aaKnown RBP5.43□□□□□ -1.54
CD44-220ENST00000525688 KIAA0408Q6ZU52 694 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 SGMS1Q86VZ5 419 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 MYCT1Q8N699 235 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 Q8NA96 180 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 GLIS1Q8NBF1 620 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 PSD4Q8NDX1 1056 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 OR56A1Q8NGH5 318 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 RAPGEF4Q8WZA2 1011 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 MUL1Q969V5 352 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 LRRC46Q96FV0 321 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 FAM89AQ96GI7 184 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 PHACTR3Q96KR7 559 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 SNX27Q96L92 541 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 RMDN3Q96TC7 470 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 GPR87Q9BY21 358 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 FAM83DQ9H4H8 585 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 RIC8AQ9NPQ8 531 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 HEYLQ9NQ87 328 aaPredicted RBP5.43□□□□□ -1.54
CD44-220ENST00000525688 HSFX1Q9UBD0 423 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 DKK4Q9UBT3 224 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 ACAD8Q9UKU7 415 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 SHOC2Q9UQ13 582 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 CHST2Q9Y4C5 530 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 RAD54BQ9Y620 910 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 PREX2Q70Z35 1606 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 ADGRL1O94910 1474 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 XDHP47989 1333 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 ARHGAP5Q13017 1502 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 RICTORQ6R327 1708 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 CDC42BPBQ9Y5S2 1711 aa5.43□□□□□ -1.54
CD44-220ENST00000525688 POGZQ7Z3K3 1410 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 SCAPERQ9BY12 1400 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 A0A1B0GTW7 788 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 PODXLO00592 558 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 SNX2O60749 519 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 VPS4BO75351 444 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 NDST3O95803 873 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 ZSCAN22P10073 491 aaPredicted RBP5.42□□□□□ -1.54
CD44-220ENST00000525688 HSD3B1P14060 373 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 IDEP14735 1019 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 KCNA2P16389 499 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 TNFAIP3P21580 790 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 LRPAP1P30533 357 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 APOBEC3AP31941 199 aaPredicted RBP5.42□□□□□ -1.54
CD44-220ENST00000525688 SERPINF1P36955 418 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 MAN2A2P49641 1150 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 NUCB1Q02818 461 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 GRM1Q13255 1194 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 PDE1CQ14123 709 aaPredicted RBP5.42□□□□□ -1.54
CD44-220ENST00000525688 SPARCL1Q14515 664 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 TAF11Q15544 211 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 MGAT5BQ3V5L5 792 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 UBXN11Q5T124 520 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 PLAG1Q6DJT9 500 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 MZT2BQ6NZ67 158 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 TAF2Q6P1X5 1199 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 FBXO38Q6PIJ6 1188 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 GLB1LQ6UWU2 654 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 LIMS2Q7Z4I7 341 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms