RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 ZFP28Q8NHY6 868 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 TBC1D15Q8TC07 691 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 ADAMTS15Q8TE58 950 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 C3orf49Q96BT1 292 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 GRAMD1AQ96CP6 724 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 SLC46A1Q96NT5 459 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 SPATA25Q9BR10 227 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 MCOLN1Q9GZU1 580 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 VPS16Q9H269 839 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 NSMCE4AQ9NXX6 385 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 TBX20Q9UMR3 447 aa6.75□□□□□ -1.33
ATM-208ENST00000525537 FAM90A18PA6NE21 464 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 FAM90A16PA6NEW6 464 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 FAM90A9PA6NNJ1 464 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 FAM90A5PA8MXJ8 464 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 DCLK1O15075 740 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 TMEM63AO94886 807 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 ATXN1LP0C7T5 689 aaKnown RBP6.74□□□□□ -1.33
ATM-208ENST00000525537 FAM90A15PP0C7V4 464 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 FAM90A14PP0C7W9 464 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 JUNBP17275 347 aaPredicted RBP6.74□□□□□ -1.33
ATM-208ENST00000525537 AKT1P31749 480 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 MCM2P49736 904 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 SATB1Q01826 763 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 KRT17Q04695 432 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.74□□□□□ -1.33
ATM-208ENST00000525537 GPS1Q13098 491 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 BOP1Q14137 746 aaKnown RBP6.74□□□□□ -1.33
ATM-208ENST00000525537 KRT32Q14532 448 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 ANKRD1Q15327 319 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 SMAD1Q15797 465 aaKnown RBP6.74□□□□□ -1.33
ATM-208ENST00000525537 MEA1Q16626 185 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 BTBD16Q32M84 506 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 FAM133BQ5BKY9 247 aaKnown RBP6.74□□□□□ -1.33
ATM-208ENST00000525537 SLC9C2Q5TAH2 1124 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 TSHZ3Q63HK5 1081 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 TMEM132EQ6IEE7 984 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 RINLQ6ZS11 566 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 DOK3Q7L591 496 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 SP8Q8IXZ3 490 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 USP38Q8NB14 1042 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 WDR60Q8WVS4 1066 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 GOLGA1Q92805 767 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 PWWP2AQ96N64 755 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 REEP2Q9BRK0 252 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 TTYH3Q9C0H2 523 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 EPC1Q9H2F5 836 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 PRKRIP1Q9H875 184 aaPredicted RBP6.74□□□□□ -1.33
ATM-208ENST00000525537 ETAA1Q9NY74 926 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 ORC3Q9UBD5 711 aaPredicted RBP6.74□□□□□ -1.33
ATM-208ENST00000525537 DERAQ9Y315 318 aa6.74□□□□□ -1.33
ATM-208ENST00000525537 RRP7AQ9Y3A4 280 aaKnown RBP6.74□□□□□ -1.33
ATM-208ENST00000525537 LMTK3Q96Q04 1460 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 UBE2QL1A1L167 161 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 DBX1A6NMT0 343 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 EFCAB8A8MWE9 144 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.73□□□□□ -1.33
ATM-208ENST00000525537 E7EVH7 732 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 J3KTA2 159 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 DHHO43323 396 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 SEMA7AO75326 666 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 VPS4BO75351 444 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 RASAL1O95294 804 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 CYP1A1P04798 512 aaPredicted RBP6.73□□□□□ -1.33
ATM-208ENST00000525537 SLC6A2P23975 617 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 LRPAP1P30533 357 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 TOB1P50616 345 aaPredicted RBP6.73□□□□□ -1.33
ATM-208ENST00000525537 GRM4Q14833 912 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 CCNG2Q16589 344 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 FAM205BPQ63HN1 556 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 ATG16L1Q676U5 607 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 HAUS3Q68CZ6 603 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 ABLIM2Q6H8Q1 611 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 MPZL3Q6UWV2 235 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 GALNT5Q7Z7M9 940 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 ZNF280BQ86YH2 543 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 GPATCH11Q8N954 259 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 CPT1BQ92523 772 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 TFAP2CQ92754 450 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 CENPOQ9BU64 300 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 LMAN2LQ9H0V9 348 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 ABHD16BQ9H3Z7 469 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 CHODLQ9H9P2 273 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 NDUFAF4Q9P032 175 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 GPR34Q9UPC5 381 aa6.73□□□□□ -1.33
ATM-208ENST00000525537 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 PNMA6EA0A0J9YXQ4 647 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 POLRMTO00411 1230 aaKnown RBP6.72□□□□□ -1.33
ATM-208ENST00000525537 PPP6R2O75170 966 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 KRT38O76015 456 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 STC2O76061 302 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 TFRCP02786 760 aaKnown RBP6.72□□□□□ -1.33
ATM-208ENST00000525537 COPB2P35606 906 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 CDK7P50613 346 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 DGKEP52429 567 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 DRG2P55039 364 aaKnown RBP6.72□□□□□ -1.33
ATM-208ENST00000525537 PIGFQ07326 219 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 RPS6KA2Q15349 733 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 FAM214AQ32MH5 1076 aa6.72□□□□□ -1.33
ATM-208ENST00000525537 ZIK1Q3SY52 487 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms