RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 WNT9AO14904 365 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 PRKCAP17252 672 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CD72P21854 359 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 TACR1P25103 407 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 ABCG1P45844 678 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CXCL12P48061 93 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CORO7P57737 925 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 IL2P60568 153 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 SPIRE1Q08AE8 756 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 GIT2Q14161 759 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 ZNF852Q6ZMS4 543 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 FAM43BQ6ZT52 329 aaPredicted RBP8□□□□□ -1.13
NEDD8-203ENST00000524927 CHST3Q7LGC8 479 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CHCHD4Q8N4Q1 142 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CMASQ8NFW8 434 aaPredicted RBP8□□□□□ -1.13
NEDD8-203ENST00000524927 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CDIP1Q9H305 208 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 IFT22Q9H7X7 185 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CBLCQ9ULV8 474 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 IRAK3Q9Y616 596 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 ZFP37Q9Y6Q3 630 aaPredicted RBP8□□□□□ -1.13
NEDD8-203ENST00000524927 PCNX2A6NKB5 2137 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CLUHO75153 1309 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 CACNA1EQ15878 2313 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 MYH8P13535 1937 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 LOXHD1Q8IVV2 1947 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 DOCK8Q8NF50 2099 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 B8ZZF3 427 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 ALG1L2C9J202 215 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.99□□□□□ -1.13
NEDD8-203ENST00000524927 PYCARD-AS1I3L0S3 204 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 NRDCO43847 1150 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 BRINP1O60477 761 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 PAPSS2O95340 614 aaPredicted RBP7.99□□□□□ -1.13
NEDD8-203ENST00000524927 COL6A2P12110 1019 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 KRT15P19012 456 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 ATP8B2P98198 1209 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 LY6KQ17RY6 165 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 FYB2Q5VWT5 728 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 TSHZ1Q6ZSZ6 1077 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 OVCH1Q7RTY7 1134 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 CACNA2D4Q7Z3S7 1137 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 CHST14Q8NCH0 376 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 DNERQ8NFT8 737 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 MDM1Q8TC05 714 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 DYNLL2Q96FJ2 89 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 CEP89Q96ST8 783 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 ORAI3Q9BRQ5 295 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 MTA3Q9BTC8 594 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 SMOC1Q9H4F8 434 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 EPB41L1Q9H4G0 881 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 PRORYQ9H606 182 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 CWH43Q9H720 699 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 TMEM9BQ9NQ34 198 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 NYAP2Q9P242 653 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 ANKMY1Q9P2S6 941 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 LRRK2Q5S007 2527 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 C2orf16Q68DN1 1984 aa7.99□□□□□ -1.13
NEDD8-203ENST00000524927 SPAG17Q6Q759 2223 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 TBKBP1A7MCY6 615 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 CXCL14O95715 111 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 PDGFRBP09619 1106 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 SMIM10L2AP0DMW4 78 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 SMIM10L2BP0DMW5 78 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 RAC2P15153 192 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 PDE6AP16499 860 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 HOXA6P31267 233 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 SIM1P81133 766 aaPredicted RBP7.98□□□□□ -1.13
NEDD8-203ENST00000524927 MVKQ03426 396 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 STAT4Q14765 748 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 KIR3DS1Q14943 382 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 FBXO47Q5MNV8 452 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 MROH9Q5TGP6 573 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 TCEAL6Q6IPX3 200 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 CCNI2Q6ZMN8 369 aaPredicted RBP7.98□□□□□ -1.13
NEDD8-203ENST00000524927 TPRG1Q6ZUI0 275 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 OSTM1Q86WC4 334 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 PLEKHO2Q8TD55 490 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 STAG1Q8WVM7 1258 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 TCEAL3Q969E4 200 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 ZNF558Q96NG5 402 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 PLCD4Q9BRC7 762 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 RIOK1Q9BRS2 568 aaKnown RBP7.98□□□□□ -1.13
NEDD8-203ENST00000524927 C16orf70Q9BSU1 422 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 USP44Q9H0E7 712 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 RNPEPQ9H4A4 650 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 SPG21Q9NZD8 308 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 B4GALT6Q9UBX8 382 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 ACSL6Q9UKU0 697 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 SYNPO2Q9UMS6 1093 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 PCDHB7Q9Y5E2 793 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 X6R8D5 127 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 SALL3Q9BXA9 1300 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 FANCIQ9NVI1 1328 aa7.98□□□□□ -1.13
NEDD8-203ENST00000524927 TEX51A0A1B0GUA7 166 aa7.97□□□□□ -1.13
NEDD8-203ENST00000524927 SPAARA0A1B0GVQ0 90 aa7.97□□□□□ -1.13
NEDD8-203ENST00000524927 LNP1A1A4G5 178 aa7.97□□□□□ -1.13
NEDD8-203ENST00000524927 PTPDC1A2A3K4 754 aa7.97□□□□□ -1.13
NEDD8-203ENST00000524927 NEMP1O14524 444 aa7.97□□□□□ -1.13
NEDD8-203ENST00000524927 MSL3P1P0C860 447 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms