RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 CAVIN3Q969G5 261 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 SMARCD1Q96GM5 515 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 ACBD6Q9BR61 282 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 COLEC11Q9BWP8 271 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 LRRC19Q9H756 370 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 PRDM16Q9HAZ2 1276 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 DMGDHQ9UI17 866 aaKnown RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 STAP1Q9ULZ2 295 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 FRMPD3Q5JV73 1810 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 SCN1AP35498 2009 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 LRRD1A4D1F6 860 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 TMEM189-UBE2V1I3L0A0 370 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 OPA1O60313 960 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 MGEA5O60502 916 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 HSF2BPO75031 334 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 RFC2P35250 354 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 PTPN9P43378 593 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 MARCKSL1P49006 195 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 RGS7P49802 495 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 TAS2R40P59535 323 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 CAV1Q03135 178 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 CALCOCO2Q13137 446 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 CASP8Q14790 479 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 PDK2Q15119 407 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 PKN2Q16513 984 aaKnown RBP10.47□□□□□ -0.73
VPS13B-212ENST00000524330 CCNG2Q16589 344 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 TFDP3Q5H9I0 405 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 MDH1BQ5I0G3 518 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 ALS2CLQ60I27 953 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 SPOCD1Q6ZMY3 1216 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 SND1Q7KZF4 910 aaKnown RBP eCLIP10.47□□□□□ -0.73
VPS13B-212ENST00000524330 SLC26A9Q7LBE3 791 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 ADAT2Q7Z6V5 191 aaKnown RBP10.47□□□□□ -0.73
VPS13B-212ENST00000524330 TTC30AQ86WT1 665 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 DCP1BQ8IZD4 617 aaKnown RBP10.47□□□□□ -0.73
VPS13B-212ENST00000524330 ANKLE1Q8NAG6 615 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 GSTCDQ8NEC7 633 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 MYCBPAPQ8TBZ2 947 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.47□□□□□ -0.73
VPS13B-212ENST00000524330 TEKT4Q8WW24 435 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 RXFP2Q8WXD0 754 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 TOX2Q96NM4 488 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 ERP44Q9BS26 406 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 OXCT2Q9BYC2 517 aaPredicted RBP10.47□□□□□ -0.73
VPS13B-212ENST00000524330 CXCL16Q9H2A7 254 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 RRN3Q9NYV6 651 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.47□□□□□ -0.731e-6■□□□□ 8.4
VPS13B-212ENST00000524330 AMACRQ9UHK6 382 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 CYTH4Q9UIA0 394 aa10.47□□□□□ -0.73
VPS13B-212ENST00000524330 C2CD4BA6NLJ0 364 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 F8VP50 259 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 M0QZQ0 153 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 SYN3O14994 580 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 TTI1O43156 1089 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 SEC31AO94979 1220 aaKnown RBP10.46□□□□□ -0.73
VPS13B-212ENST00000524330 TRUB2O95900 331 aaKnown RBP10.46□□□□□ -0.73
VPS13B-212ENST00000524330 PFKMP08237 780 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 RARAP10276 462 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 RALAP11233 206 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 FGFR1P11362 822 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 LCP1P13796 627 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 CCDC130P13994 396 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 ZFXP17010 805 aaPredicted RBP10.46□□□□□ -0.73
VPS13B-212ENST00000524330 LMO2P25791 158 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 RPL34P49207 117 aaKnown RBP10.46□□□□□ -0.73
VPS13B-212ENST00000524330 KRT81Q14533 505 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 PLEKHG4Q58EX7 1191 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 CFAP58Q5T655 872 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 OVOS1Q6IE37 1185 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 PMF1Q6P1K2 205 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 LLGL2Q6P1M3 1020 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 OLFML1Q6UWY5 402 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 OSTM1Q86WC4 334 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 VSIG1Q86XK7 387 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 JAMLQ86YT9 394 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 PRELID2Q8N945 189 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 CCDC89Q8N998 374 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 JOSD2Q8TAC2 188 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 AENQ8WTP8 325 aaKnown RBP10.46□□□□□ -0.73
VPS13B-212ENST00000524330 SLCO2A1Q92959 643 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
VPS13B-212ENST00000524330 CCDC114Q96M63 670 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 SLITRK1Q96PX8 696 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 FERMT1Q9BQL6 677 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 TMEM175Q9BSA9 504 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 FUT8Q9BYC5 575 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 TRIM7Q9C029 511 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 DPEP3Q9H4B8 488 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 ZWILCHQ9H900 591 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 MED4Q9NPJ6 270 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 CNGB3Q9NQW8 809 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 MIOSQ9NXC5 875 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 USP18Q9UMW8 372 aa10.46□□□□□ -0.73
VPS13B-212ENST00000524330 TDRD15B5MCY1 1934 aaKnown RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 MEIS3P2A8K0S8 358 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 ZNF487B1APH4 448 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 MAP2K7O14733 419 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms