RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CA3P07451 260 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 VIMP08670 466 aaKnown RBP8.25□□□□□ -1.09
SPIDR-223ENST00000524033 ZNF286BP0CG31 522 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 CKBP12277 381 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 CREB1P16220 341 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 ITIH2P19823 946 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 SCP2P22307 547 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 MAN1A1P33908 653 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 KCNJ1P48048 391 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 GPC3P51654 580 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 NCKAP1LP55160 1127 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 RWDD2BP57060 319 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 CLDN10P78369 228 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 GTF2BQ00403 316 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 CDR2Q01850 454 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 KRT17Q04695 432 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 PTK7Q13308 1070 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 MPP2Q14168 576 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 MESDQ14696 234 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 CCDC38Q502W7 563 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 FAM133BQ5BKY9 247 aaKnown RBP8.25□□□□□ -1.09
SPIDR-223ENST00000524033 ODR4Q5SWX8 454 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 ACAD10Q6JQN1 1059 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 ZNF746Q6NUN9 644 aaPredicted RBP8.25□□□□□ -1.09
SPIDR-223ENST00000524033 RGS9BPQ6ZS82 235 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 NIPA1Q7RTP0 329 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 CYP2U1Q7Z449 544 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 SPATA21Q7Z572 469 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 CEP57Q86XR8 500 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 HERC6Q8IVU3 1022 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 TPH2Q8IWU9 490 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 RIBC1Q8N443 379 aaPredicted RBP8.25□□□□□ -1.09
SPIDR-223ENST00000524033 IL31RAQ8NI17 732 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 UHMK1Q8TAS1 419 aaKnown RBP8.25□□□□□ -1.09
SPIDR-223ENST00000524033 HELQQ8TDG4 1101 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 MAIP1Q8WWC4 291 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 ZNF653Q96CK0 615 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 SNF8Q96H20 258 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 ZNF570Q96NI8 536 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 ACCSQ96QU6 501 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 RIT2Q99578 217 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 HERPUD2Q9BSE4 406 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 TEKT3Q9BXF9 490 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 TMEM206Q9H813 350 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 RXFP1Q9HBX9 757 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 BATF3Q9NR55 127 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 GTF2IRD1Q9UHL9 959 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 BAIAP2L1Q9UHR4 511 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 DBR1Q9UK59 544 aaKnown RBP8.25□□□□□ -1.09
SPIDR-223ENST00000524033 DOCK5Q9H7D0 1870 aa8.25□□□□□ -1.09
SPIDR-223ENST00000524033 PLXNA1Q9UIW2 1896 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 ARHGEF35A5YM69 484 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 SPATA31C2B4DYI2 1134 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 TISP43B9A030 160 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 H3BRB1 525 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 HAS3O00219 553 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 NOP56O00567 594 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 GAS7O60861 476 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 STAM2O75886 525 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 KRT16P08779 473 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 ARP10275 920 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 HOXD8P13378 290 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 TAC1P20366 129 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 UBA1P22314 1058 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CCND1P24385 295 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 ZNF76P36508 570 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 SLCO1A2P46721 670 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 IFNAR2P48551 515 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 MXI1P50539 228 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CLNS1AP54105 237 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 SLC18A1P54219 525 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 SEC13P55735 322 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 WDR4P57081 412 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 MRPS9P82933 396 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 ZNF200P98182 395 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CENPCQ03188 943 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 KLF1Q13351 362 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 IKBKEQ14164 716 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 ELOAQ14241 798 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 GPNMBQ14956 572 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 LONRF1Q17RB8 773 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CLEC16AQ2KHT3 1053 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 PARP6Q2NL67 630 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 GNPTABQ3T906 1256 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 SPDYAQ5MJ70 313 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 XRRA1Q6P2D8 792 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 LRRC8DQ7L1W4 858 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 TBC1D1Q86TI0 1168 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 TDRPQ86YL5 185 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CCDC105Q8IYK2 499 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 ZSWIM2Q8NEG5 633 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 STK32AQ8WU08 396 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 MAML1Q92585 1016 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 DHX38Q92620 1227 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 SEMA4DQ92854 862 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 UTP4Q969X6 686 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 GRAMD1AQ96CP6 724 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 RMDN2Q96LZ7 410 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 MAGEB18Q96M61 343 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 ANKRD27Q96NW4 1050 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms