RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 PPP2R5DQ14738 602 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 EDRF1Q3B7T1 1238 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 C1orf220Q5T0J3 134 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 TXNDC11Q6PKC3 985 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 MAMSTRQ6ZN01 415 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 CYP2S1Q96SQ9 504 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 TTLL2Q9BWV7 592 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 B3GNT5Q9BYG0 378 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 IMPG2Q9BZV3 1241 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 ZNF518BQ9C0D4 1074 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 TRPM5Q9NZQ8 1165 aa17.27■□□□□ 0.36
CLN8-206ENST00000523237 MYO15AQ9UKN7 3530 aa17.27■□□□□ 0.35
CLN8-206ENST00000523237 C2orf78A6NCI8 922 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 CLDN5O00501 218 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 KINO60870 393 aaKnown RBP17.26■□□□□ 0.35
CLN8-206ENST00000523237 ASS1P00966 412 aaKnown RBP17.26■□□□□ 0.35
CLN8-206ENST00000523237 HLA-DRAP01903 254 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 PFKLP17858 780 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 HDCP19113 662 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 CCR3P51677 355 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 USP46P62068 366 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 MTF1Q14872 753 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 PDGFRLQ15198 375 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 ZCWPW2Q504Y3 356 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 DGKKQ5KSL6 1271 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 SMYD4Q8IYR2 804 aaPredicted RBP17.26■□□□□ 0.35
CLN8-206ENST00000523237 ADSSL1Q8N142 457 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 ARL14EPQ8N8R7 260 aaPredicted RBP17.26■□□□□ 0.35
CLN8-206ENST00000523237 RIN3Q8TB24 985 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 ELMO3Q96BJ8 720 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 GSDMAQ96QA5 445 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 SLC22A12Q96S37 553 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 MED10Q9BTT4 135 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 SDCBP2Q9H190 292 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 EBF3Q9H4W6 596 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 GCNT4Q9P109 453 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 HOOK1Q9UJC3 728 aaKnown RBP17.26■□□□□ 0.35
CLN8-206ENST00000523237 PCDHGA2Q9Y5H1 932 aa17.26■□□□□ 0.35
CLN8-206ENST00000523237 SMC2O95347 1197 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 TRIM49P0CI25 452 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 TRIM49CP0CI26 452 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 TRIM21P19474 475 aaKnown RBP17.25■□□□□ 0.35
CLN8-206ENST00000523237 CACNA2D1P54289 1103 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 AMPD2Q01433 879 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 USP4Q13107 963 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 PON2Q15165 354 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 ZNF77Q15935 545 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 TRIM68Q6AZZ1 485 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 ACOT1Q86TX2 421 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 FAM35AQ86V20 835 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 UNC93AQ86WB7 457 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 TTC16Q8NEE8 873 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 ENGASEQ8NFI3 743 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 ATRIPQ8WXE1 791 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 SLITRK1Q96PX8 696 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 FAM126AQ9BYI3 521 aaPredicted RBP17.25■□□□□ 0.35
CLN8-206ENST00000523237 HPS4Q9NQG7 708 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 TMEM30AQ9NV96 361 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 ZSCAN32Q9NX65 697 aa17.25■□□□□ 0.35
CLN8-206ENST00000523237 ZNF840PA6NDX5 716 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 RTN3O95197 1032 aaPredicted RBP17.24■□□□□ 0.35
CLN8-206ENST00000523237 TCF3P15923 654 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 ASPAP45381 313 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 GCLMP48507 274 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 NDST1P52848 882 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 NRLP54845 237 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 PPP3CAQ08209 521 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 ZNF658Q5TYW1 1059 aaPredicted RBP17.24■□□□□ 0.35
CLN8-206ENST00000523237 SPOPLQ6IQ16 392 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 TSSK4Q6SA08 328 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 NUP93Q8N1F7 819 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 SYNPOQ8N3V7 929 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 SPEM1Q8N4L4 309 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 SH3RF2Q8TEC5 729 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 OSCP1Q8WVF1 389 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 NELL1Q92832 810 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 SMARCD1Q96GM5 515 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 TIGD1Q96MW7 591 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 GTPBP4Q9BZE4 634 aaKnown RBP17.24■□□□□ 0.35
CLN8-206ENST00000523237 MMRN2Q9H8L6 949 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 DMAP1Q9NPF5 467 aaPredicted RBP17.24■□□□□ 0.35
CLN8-206ENST00000523237 RBM12Q9NTZ6 932 aaKnown RBP17.24■□□□□ 0.35
CLN8-206ENST00000523237 DUS2Q9NX74 493 aaKnown RBP17.24■□□□□ 0.35
CLN8-206ENST00000523237 ARHGAP26Q9UNA1 814 aa17.24■□□□□ 0.35
CLN8-206ENST00000523237 CETN3O15182 167 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 ABL1P00519 1130 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 EPB41P11171 864 aaKnown RBP17.23■□□□□ 0.35
CLN8-206ENST00000523237 ARSAP15289 507 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 YWHAQP27348 245 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 GTF2H1P32780 548 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 PRCPP42785 496 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 CXCL12P48061 93 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 IFNAR2P48551 515 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 IFRD2Q12894 506 aaPredicted RBP17.23■□□□□ 0.35
CLN8-206ENST00000523237 TAF10Q12962 218 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 CCINQ13939 588 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 COBLL1Q53SF7 1204 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 PAQR9Q6ZVX9 377 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 CRYBG2Q8N1P7 616 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 CPA6Q8N4T0 437 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms