RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 HSPA13P48723 471 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 MTHFSP49914 203 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 HADHBP55084 474 aaKnown RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 SEC13P55735 322 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TAP1Q03518 808 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TRIM32Q13049 653 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 SELENBP1Q13228 472 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 NR5A1Q13285 461 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 KRT32Q14532 448 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 EFTUD2Q15029 972 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 SLC9C2Q5TAH2 1124 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 AGAP7PQ5VUJ5 663 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 AADACL4Q5VUY2 407 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 USP51Q70EK9 711 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 LPCAT2Q7L5N7 544 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TSPYL5Q86VY4 417 aaPredicted RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 KSR1Q8IVT5 923 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TRMT44Q8IYL2 757 aaKnown RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 MINDY2Q8NBR6 621 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 RAPGEF4Q8WZA2 1011 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 VPS33AQ96AX1 596 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 GMCL1Q96IK5 515 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 C7orf26Q96N11 449 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 SERPINB12Q96P63 405 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 CADM1Q9BY67 442 aaKnown RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 WNT8AQ9H1J5 351 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 ZNF696Q9H7X3 374 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 UCK1Q9HA47 277 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 CYP26B1Q9NR63 512 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 OLFML3Q9NRN5 406 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 SACM1LQ9NTJ5 587 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 SMARCAL1Q9NZC9 954 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TSPYL4Q9UJ04 414 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 MROH7-TTC4A0A0A0MT08 1334 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 A0A087WZG4 1122 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 MAGEB16A2A368 324 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 RCCD1A6NED2 376 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 ATP6V1G2-DDX39BF2Z307 99 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 RAD51CO43502 376 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 CASP5P51878 434 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 COPB1P53618 953 aaKnown RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 SLC5A3P53794 718 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 STX1BP61266 288 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 ERVK-9P63128 1117 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 CREB5Q02930 508 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 PTH1RQ03431 593 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 CDC20Q12834 499 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 APOFQ13790 326 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TRADDQ15628 312 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TRIM16LQ309B1 348 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 VARS2Q5ST30 1063 aaKnown RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 FAM83BQ5T0W9 1011 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 IQSEC1Q6DN90 963 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 PPP4R3CPQ6ZMV5 832 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 RALYLQ86SE5 291 aaKnown RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TRIM63Q969Q1 353 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 CNDP2Q96KP4 475 aaKnown RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TRIM47Q96LD4 638 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 BTBD9Q96Q07 612 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 MED15Q96RN5 788 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 KRT12Q99456 494 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 MIPEPQ99797 713 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 HEMGNQ9BXL5 484 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TDRD1Q9BXT4 1180 aaKnown RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 ZNF717Q9BY31 904 aaPredicted RBP8.62□□□□□ -1.03
HMGB4-204ENST00000522796 RHOBTB2Q9BYZ6 727 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 ATP13A2Q9NQ11 1180 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 VTI1BQ9UEU0 232 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 MAN1B1Q9UKM7 699 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 ZMIZ1Q9ULJ6 1067 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TFR2Q9UP52 801 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 MAPRE3Q9UPY8 281 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 CHKBQ9Y259 395 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 TTC37Q6PGP7 1564 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 ERVK-7P63135 1459 aa8.62□□□□□ -1.03
HMGB4-204ENST00000522796 SH3D21A4FU49 640 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 LRRIQ4A6NIV6 560 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 GOLGA8SH3BPF8 625 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 RNF225M0QZC1 329 aaPredicted RBP8.61□□□□□ -1.03
HMGB4-204ENST00000522796 CACNB4O00305 520 aaPredicted RBP8.61□□□□□ -1.03
HMGB4-204ENST00000522796 ACOX3O15254 700 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 RGS16O15492 202 aaPredicted RBP8.61□□□□□ -1.03
HMGB4-204ENST00000522796 BUD23O43709 281 aaKnown RBP8.61□□□□□ -1.03
HMGB4-204ENST00000522796 GTPBP6O43824 516 aaPredicted RBP8.61□□□□□ -1.03
HMGB4-204ENST00000522796 DAB1O75553 588 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 CD48P09326 243 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 GSTM2P28161 218 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 PHC1P78364 1004 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 PLIN5Q00G26 463 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 IFIT5Q13325 482 aaKnown RBP8.61□□□□□ -1.03
HMGB4-204ENST00000522796 SGCGQ13326 291 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 MORC3Q14149 939 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 SGCAQ16586 387 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 MEA1Q16626 185 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 LSM12Q3MHD2 195 aaKnown RBP8.61□□□□□ -1.03
HMGB4-204ENST00000522796 SUPT20HL1Q3ZLR7 823 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 MMEL1Q495T6 779 aa8.61□□□□□ -1.03
HMGB4-204ENST00000522796 SETMARQ53H47 684 aaPredicted RBP8.61□□□□□ -1.03
HMGB4-204ENST00000522796 RBM20Q5T481 1227 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms