RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 GAP43P17677 238 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 ENGP17813 658 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 PFKLP17858 780 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 TXLNAP40222 546 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 PPP3CCP48454 512 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 ACAP1Q15027 740 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 HSF5Q4G112 596 aaPredicted RBP12.3□□□□□ -0.44
MRPS28-206ENST00000520946 TDRD10Q5VZ19 366 aaKnown RBP12.3□□□□□ -0.44
MRPS28-206ENST00000520946 VSTM1Q6UX27 236 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 DENND5BQ6ZUT9 1274 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 FILIP1Q7Z7B0 1213 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 DDX42Q86XP3 938 aaKnown RBP eCLIP12.3□□□□□ -0.44
MRPS28-206ENST00000520946 ABCA7Q8IZY2 2146 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 C1orf127Q8N9H9 656 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 LRRC15Q8TF66 581 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 EZH1Q92800 747 aaPredicted RBP12.3□□□□□ -0.44
MRPS28-206ENST00000520946 SYT15Q9BQS2 421 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 SNX25Q9H3E2 840 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 ST6GALNAC4Q9H4F1 302 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 BLOC1S4Q9NUP1 217 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 SMPD4Q9NXE4 827 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 SEL1LQ9UBV2 794 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 CDH9Q9ULB4 789 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 USP24Q9UPU5 2620 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 TCRBV21S2A2A0A5A6 115 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 TBC1D3BA6NDS4 549 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 SRRM3A6NNA2 597 aaPredicted RBP12.29□□□□□ -0.44
MRPS28-206ENST00000520946 H0Y626 953 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 AP5Z1O43299 807 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 HYAL3O43820 417 aaPredicted RBP12.29□□□□□ -0.44
MRPS28-206ENST00000520946 OPHN1O60890 802 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 KAT7O95251 611 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 TRIM16O95361 564 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 PDGFRBP09619 1106 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 MBL2P11226 248 aaPredicted RBP12.29□□□□□ -0.44
MRPS28-206ENST00000520946 IDEP14735 1019 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 TCF3P15923 654 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 BDNFP23560 247 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 GJB2P29033 226 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 OPRD1P41143 372 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 MAGEA11P43364 429 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 PSMC1P62191 440 aaKnown RBP12.29□□□□□ -0.44
MRPS28-206ENST00000520946 RPL6Q02878 288 aaKnown RBP12.29□□□□□ -0.44
MRPS28-206ENST00000520946 KDSRQ06136 332 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
MRPS28-206ENST00000520946 DHCR24Q15392 516 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 RRAGBQ5VZM2 374 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 SDE2Q6IQ49 451 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 CRELD2Q6UXH1 353 aaPredicted RBP12.29□□□□□ -0.44
MRPS28-206ENST00000520946 SV2BQ7L1I2 683 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 TRMT11Q7Z4G4 463 aaKnown RBP12.29□□□□□ -0.44
MRPS28-206ENST00000520946 RABEPKQ7Z6M1 372 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 BRSK2Q8IWQ3 736 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 CEP76Q8TAP6 659 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 HPDLQ96IR7 371 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 SPATA17Q96L03 361 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 SLITRK1Q96PX8 696 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 ARHGEF4Q9NR80 690 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 GDAP2Q9NXN4 497 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 TBC1D14Q9P2M4 693 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 LHX6Q9UPM6 363 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 SMC3Q9UQE7 1217 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 NEUROG3Q9Y4Z2 214 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 PCDHB9Q9Y5E1 797 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 CPQQ9Y646 472 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
MRPS28-206ENST00000520946 NUP205Q92621 2012 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 TSC2P49815 1807 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 SPAARA0A1B0GVQ0 90 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 SCAMP3O14828 347 aaKnown RBP12.28□□□□□ -0.44
MRPS28-206ENST00000520946 PRPF6O94906 941 aaKnown RBP12.28□□□□□ -0.44
MRPS28-206ENST00000520946 CYP17A1P05093 508 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 ADH5P11766 374 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 GARTP22102 1010 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 ADSSP30520 456 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 P2RY2P41231 377 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 GRIA2P42262 883 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 ALCAMQ13740 583 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 DUOXA1Q1HG43 343 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 SPDYCQ5MJ68 293 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 L1TD1Q5T7N2 865 aaKnown RBP12.28□□□□□ -0.44
MRPS28-206ENST00000520946 LARP1BQ659C4 914 aaKnown RBP12.28□□□□□ -0.44
MRPS28-206ENST00000520946 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 SLC36A4Q6YBV0 504 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 STXBP4Q6ZWJ1 553 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 DPH6Q7L8W6 267 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 OSTM1Q86WC4 334 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 ADGRG2Q8IZP9 1017 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 DEFB119Q8N690 84 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 MYLPFQ96A32 169 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 CEP295NLQ96MC4 621 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 FIZ1Q96SL8 496 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 MTMR12Q9C0I1 747 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 NACA2Q9H009 215 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 IKZF4Q9H2S9 585 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 PCIF1Q9H4Z3 704 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms