RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 MAPK13O15264 365 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 LILRB5O75023 590 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 PAPSS2O95340 614 aaPredicted RBP11.44□□□□□ -0.58
PVT1-209ENST00000520913 TDGF1P13385 188 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 PFKLP17858 780 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 PTPN1P18031 435 aaKnown RBP11.44□□□□□ -0.58
PVT1-209ENST00000520913 NR2F2P24468 414 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 NOP14P78316 857 aaKnown RBP11.44□□□□□ -0.58
PVT1-209ENST00000520913 AMPD2Q01433 879 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 DPYDQ12882 1025 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 CCINQ13939 588 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 BECN1Q14457 450 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 PDGFRLQ15198 375 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 NFIL3Q16649 462 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 ZACNQ401N2 412 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 CEP135Q66GS9 1140 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 TRIM68Q6AZZ1 485 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 KRBA2Q6ZNG9 492 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 SYNPOQ8N3V7 929 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 SPEM1Q8N4L4 309 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 CPA6Q8N4T0 437 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 SUMF1Q8NBK3 374 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 RIN3Q8TB24 985 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 TMC2Q8TDI7 906 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 ATP2A3Q93084 1043 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 EXOC4Q96A65 974 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 TNIP3Q96KP6 325 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 C8orf48Q96LL4 319 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 GOLPH3LQ9H4A5 285 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 EBF3Q9H4W6 596 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 HPS4Q9NQG7 708 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 RBM12Q9NTZ6 932 aaKnown RBP11.44□□□□□ -0.58
PVT1-209ENST00000520913 TRPM5Q9NZQ8 1165 aa11.44□□□□□ -0.58
PVT1-209ENST00000520913 SMG5Q9UPR3 1016 aaKnown RBP11.44□□□□□ -0.58
PVT1-209ENST00000520913 C2orf78A6NCI8 922 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 VNN1O95497 513 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 C4BPAP04003 597 aaKnown RBP11.43□□□□□ -0.58
PVT1-209ENST00000520913 TCF3P15923 654 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 PIK3CAP42336 1068 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 RAP1GAPP47736 663 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 CXCL12P48061 93 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 PPP3CCP48454 512 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 IFNAR2P48551 515 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 USP46P62068 366 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 DLG4P78352 724 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 SATB1Q01826 763 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 GAS6Q14393 721 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 WDR44Q5JSH3 913 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 Q6ZS52 159 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 FAM35AQ86V20 835 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
PVT1-209ENST00000520913 ARL14EPQ8N8R7 260 aaPredicted RBP11.43□□□□□ -0.58
PVT1-209ENST00000520913 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 OSCP1Q8WVF1 389 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 TAF4BQ92750 862 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 SLITRK1Q96PX8 696 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 SLC22A12Q96S37 553 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 IMPG2Q9BZV3 1241 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 ZNF518BQ9C0D4 1074 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 GCNT4Q9P109 453 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 NCDNQ9UBB6 729 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 ARHGAP26Q9UNA1 814 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 MYOFQ9NZM1 2061 aa11.43□□□□□ -0.58
PVT1-209ENST00000520913 PTPRZ1P23471 2315 aaPredicted RBP11.43□□□□□ -0.58
PVT1-209ENST00000520913 EP300Q09472 2414 aaPredicted RBP11.43□□□□□ -0.58
PVT1-209ENST00000520913 IKBKBO14920 756 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 ZNF202O95125 648 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 RTN3O95197 1032 aaPredicted RBP11.42□□□□□ -0.58
PVT1-209ENST00000520913 KRT13P13646 458 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 ARSAP15289 507 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 TRIM21P19474 475 aaKnown RBP11.42□□□□□ -0.58
PVT1-209ENST00000520913 VAMP7P51809 220 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 CACNA2D1P54289 1103 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 ENPEPQ07075 957 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 GRSF1Q12849 480 aaKnown RBP eCLIP11.42□□□□□ -0.58
PVT1-209ENST00000520913 SGSM1Q2NKQ1 1148 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 TMEM196Q5HYL7 178 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 INTS8Q75QN2 995 aaKnown RBP11.42□□□□□ -0.58
PVT1-209ENST00000520913 FAM186BQ8IYM0 893 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 PDZD8Q8NEN9 1154 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 SH3RF2Q8TEC5 729 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 OVCA2Q8WZ82 227 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 SECISBP2LQ93073 1101 aaKnown RBP11.42□□□□□ -0.58
PVT1-209ENST00000520913 SMARCD1Q96GM5 515 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 CYP2S1Q96SQ9 504 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 MED10Q9BTT4 135 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 B3GNT5Q9BYG0 378 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 GDPD2Q9HCC8 539 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 DMAP1Q9NPF5 467 aaPredicted RBP11.42□□□□□ -0.58
PVT1-209ENST00000520913 TMEM30AQ9NV96 361 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 DUS2Q9NX74 493 aaKnown RBP11.42□□□□□ -0.58
PVT1-209ENST00000520913 RAB23Q9ULC3 237 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 PLXND1Q9Y4D7 1925 aa11.42□□□□□ -0.58
PVT1-209ENST00000520913 LAMA1P25391 3075 aa11.41□□□□□ -0.58
PVT1-209ENST00000520913 CLDN5O00501 218 aa11.41□□□□□ -0.58
PVT1-209ENST00000520913 TRDMT1O14717 391 aaKnown RBP11.41□□□□□ -0.58
PVT1-209ENST00000520913 NFATC1O95644 943 aa11.41□□□□□ -0.58
PVT1-209ENST00000520913 OLFM2O95897 454 aa11.41□□□□□ -0.58
PVT1-209ENST00000520913 ASS1P00966 412 aaKnown RBP11.41□□□□□ -0.58
PVT1-209ENST00000520913 HLA-DRAP01903 254 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms