RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 WDR72Q3MJ13 1102 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 FOXD4L6Q3SYB3 417 aaPredicted RBP11.6□□□□□ -0.55
PVT1-208ENST00000519481 MDH1BQ5I0G3 518 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 TDRD10Q5VZ19 366 aaKnown RBP11.6□□□□□ -0.55
PVT1-208ENST00000519481 SCARA3Q6AZY7 606 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 ATL3Q6DD88 541 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 SHC4Q6S5L8 630 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 FOXD4L3Q6VB84 417 aaPredicted RBP11.6□□□□□ -0.55
PVT1-208ENST00000519481 PRR23CQ6ZRP0 262 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 FAM160A2Q8N612 972 aaPredicted RBP11.6□□□□□ -0.55
PVT1-208ENST00000519481 GAB3Q8WWW8 586 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 SNX21Q969T3 373 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 SYAP1Q96A49 352 aaPredicted RBP11.6□□□□□ -0.55
PVT1-208ENST00000519481 PCED1BQ96HM7 432 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 LOXL4Q96JB6 756 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 SLITRK1Q96PX8 696 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 ELOVL4Q9GZR5 314 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 CRTAC1Q9NQ79 661 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 C2orf42Q9NWW7 574 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 GCNT4Q9P109 453 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 CFAP45Q9UL16 551 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 WNT6Q9Y6F9 365 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.6□□□□□ -0.55
PVT1-208ENST00000519481 NCOR2Q9Y618 2525 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 DENND4CQ5VZ89 1909 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 ATP8B3O60423 1300 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 SPTBN2O15020 2390 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 DCDC2BA2VCK2 349 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 C2orf78A6NCI8 922 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 OTOL1A6NHN0 477 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 A8MXQ7 604 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 SLC9A3R1O14745 358 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 SLC30A4O14863 429 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 AXIN1O15169 862 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 AKAP3O75969 853 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 ABL1P00519 1130 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 CST3P01034 146 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 ZSCAN22P10073 491 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 PTPN1P18031 435 aaKnown RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 AFMP43652 599 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 PXNP49023 591 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 AP3M2P53677 418 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 BIRC3Q13489 604 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 KNOP1Q1ED39 458 aaKnown RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 EML3Q32P44 896 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 PKN3Q6P5Z2 889 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 C12orf56Q8IXR9 622 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 C12orf50Q8NA57 414 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 RPLP0P6Q8NHW5 317 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 RIN3Q8TB24 985 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 SCFD1Q8WVM8 642 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 CHFRQ96EP1 664 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 C8orf48Q96LL4 319 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 SLC22A12Q96S37 553 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 MRPL45Q9BRJ2 306 aaKnown RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 TTLL2Q9BWV7 592 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 BLZF1Q9H2G9 400 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 SLC39A2Q9NP94 309 aa11.59□□□□□ -0.55
PVT1-208ENST00000519481 NXF1Q9UBU9 619 aaKnown RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 KIF26AQ9ULI4 1882 aaPredicted RBP11.59□□□□□ -0.55
PVT1-208ENST00000519481 SDK1Q7Z5N4 2213 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 F8VP50 259 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 RTN3O95197 1032 aaPredicted RBP11.58□□□□□ -0.56
PVT1-208ENST00000519481 APBB3O95704 486 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 STAU1O95793 577 aaKnown RBP11.58□□□□□ -0.56
PVT1-208ENST00000519481 F13A1P00488 732 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 P4HA1P13674 534 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 NOP14P78316 857 aaKnown RBP11.58□□□□□ -0.56
PVT1-208ENST00000519481 BMT2Q1RMZ1 405 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 AASDHQ4L235 1098 aaPredicted RBP11.58□□□□□ -0.56
PVT1-208ENST00000519481 IL31Q6EBC2 164 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 SYT13Q7L8C5 426 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 DDX42Q86XP3 938 aaKnown RBP eCLIP11.58□□□□□ -0.56
PVT1-208ENST00000519481 KIAA1958Q8N8K9 716 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 PDZD8Q8NEN9 1154 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 DDX1Q92499 740 aaKnown RBP11.58□□□□□ -0.56
PVT1-208ENST00000519481 HHIPQ96QV1 700 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 FBRSL1Q9HCM7 1045 aaKnown RBP11.58□□□□□ -0.56
PVT1-208ENST00000519481 EXOC1Q9NV70 894 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 PCDHA7Q9UN72 937 aa11.58□□□□□ -0.56
PVT1-208ENST00000519481 RALGAPA1Q6GYQ0 2036 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 ATG2BQ96BY7 2078 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 ZNF840PA6NDX5 716 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 LEFTY2O00292 366 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 TRIM21P19474 475 aaKnown RBP11.57□□□□□ -0.56
PVT1-208ENST00000519481 YWHAQP27348 245 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 CASP1P29466 404 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 MYL6P60660 151 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 USP46P62068 366 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 SLC7A9P82251 487 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 EHHADHQ08426 723 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 IFRD2Q12894 506 aaPredicted RBP11.57□□□□□ -0.56
PVT1-208ENST00000519481 TAF10Q12962 218 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 CUL4BQ13620 913 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 DMC1Q14565 340 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 ELF2Q15723 593 aa11.57□□□□□ -0.56
PVT1-208ENST00000519481 ZNF699Q32M78 642 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms