RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 RAG1P15918 1043 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 PSMA2P25787 234 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 SSR1P43307 286 aaKnown RBP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 PEX5P50542 639 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 RWDD2BP57060 319 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 TSPY1Q01534 308 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 OGDHQ02218 1023 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 YWHAHQ04917 246 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 ZNF252P-AS1Q0IIN9 211 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 MAPRE1Q15691 268 aaKnown RBP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 RHOT1Q8IXI2 618 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 NIPA2Q8N8Q9 360 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 NOA1Q8NC60 698 aaKnown RBP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 PCED1BQ96HM7 432 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 HSFY1Q96LI6 401 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 NAP1L3Q99457 506 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 TMEM175Q9BSA9 504 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 PLVAPQ9BX97 442 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 B3GNT5Q9BYG0 378 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 TTC7AQ9ULT0 858 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-209ENST00000519141 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 ABHD14A-ACY1A0A1B0GW23 586 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 TRIM43BA6NCK2 446 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 NRP1O14786 923 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 UPP2O95045 317 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 ALDH2P05091 517 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 SLC11A1P49279 550 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 ZNF211Q13398 564 aaPredicted RBP13.02□□□□□ -0.32
SPIDR-209ENST00000519141 OLFML1Q6UWY5 402 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 TMEM199Q8N511 208 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 GPR161Q8N6U8 529 aaKnown RBP13.02□□□□□ -0.32
SPIDR-209ENST00000519141 EMC1Q8N766 993 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 MYLPFQ96A32 169 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.32
SPIDR-209ENST00000519141 VWCEQ96DN2 955 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 FAN1Q9Y2M0 1017 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 VWA8A3KMH1 1905 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 PTPRDP23468 1912 aa13.02□□□□□ -0.32
SPIDR-209ENST00000519141 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 SYN3O14994 580 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 PAPSS1O43252 624 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-209ENST00000519141 EFCAB14O75071 495 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 AP1G2O75843 785 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 FGGP02679 453 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 LCP1P13796 627 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 CSF2RAP15509 400 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 BMP8BP34820 402 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 SCNN1AP37088 669 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 MAGEA10P43363 369 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-209ENST00000519141 RPL34P49207 117 aaKnown RBP13.02□□□□□ -0.33
SPIDR-209ENST00000519141 SLC6A3Q01959 620 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 DAB2IPQ5VWQ8 1189 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 MFSD5Q6N075 450 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 CCDC70Q6NSX1 233 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 CC2D1AQ6P1N0 951 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-209ENST00000519141 CLEC20AQ6ZU45 233 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 PIGZQ86VD9 579 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 MMGT1Q8N4V1 131 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 OR10T2Q8NGX3 314 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 SMARCD1Q96GM5 515 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 PIWIL1Q96J94 861 aaKnown RBP13.02□□□□□ -0.33
SPIDR-209ENST00000519141 RBM12Q9NTZ6 932 aaKnown RBP13.02□□□□□ -0.33
SPIDR-209ENST00000519141 HCSTQ9UBK5 93 aa13.02□□□□□ -0.33
SPIDR-209ENST00000519141 SF3B1O75533 1304 aaKnown RBP eCLIP13.02□□□□□ -0.332e-6■■■■■ 172.3
SPIDR-209ENST00000519141 A0A1W2PPC1 479 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 F8VP50 259 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 GABBR2O75899 941 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 AMHP03971 560 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 DESP17661 470 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 GPD1P21695 349 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 ITGB8P26012 769 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 GJC1P36383 396 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 BCAR1P56945 870 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 MAP3K7CLP57077 242 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 TAS2R40P59535 323 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 ADIGQ0VDE8 80 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 ELAVL2Q12926 359 aaKnown RBP13.01□□□□□ -0.33
SPIDR-209ENST00000519141 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 LRRC38Q5VT99 294 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 FAM171BQ6P995 826 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 SCUBE3Q8IX30 993 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 KCTD13Q8WZ19 329 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 PKMYT1Q99640 499 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 CNPY3Q9BT09 278 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 MARCH5Q9NX47 278 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 TMEM59LQ9UK28 342 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 PATJQ8NI35 1801 aa13.01□□□□□ -0.33
SPIDR-209ENST00000519141 GOLGA6L10A0A0M3HER8 536 aa13□□□□□ -0.33
SPIDR-209ENST00000519141 C2CD4BA6NLJ0 364 aa13□□□□□ -0.33
SPIDR-209ENST00000519141 KRIT1O00522 736 aa13□□□□□ -0.33
SPIDR-209ENST00000519141 GRAP2O75791 330 aa13□□□□□ -0.33
SPIDR-209ENST00000519141 DGKIO75912 1065 aa13□□□□□ -0.33
SPIDR-209ENST00000519141 RNF8O76064 485 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms