RNA–Protein interactions for RNA: ENST00000519020.5

FAM49B-210, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-210ENST00000519020 PDGFRLQ15198 375 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 CCDC142Q17RM4 750 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 ZNF658Q5TYW1 1059 aaPredicted RBP17.05■□□□□ 0.32
FAM49B-210ENST00000519020 SYNPOQ8N3V7 929 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 ENGASEQ8NFI3 743 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 OVCA2Q8WZ82 227 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 SMARCD1Q96GM5 515 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 LRRC3BQ96PB8 259 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 SLITRK1Q96PX8 696 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 TSG101Q99816 390 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 FAM83CQ9BQN1 747 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 FAM124BQ9H5Z6 455 aaPredicted RBP17.05■□□□□ 0.32
FAM49B-210ENST00000519020 PRMT8Q9NR22 394 aaPredicted RBP17.05■□□□□ 0.32
FAM49B-210ENST00000519020 COMMD8Q9NX08 183 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 NME7Q9Y5B8 376 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 KIAA1549LQ6ZVL6 1849 aa17.05■□□□□ 0.32
FAM49B-210ENST00000519020 ZFHX2Q9C0A1 2572 aaPredicted RBP17.04■□□□□ 0.32
FAM49B-210ENST00000519020 SPAG17Q6Q759 2223 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 F8VP50 259 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 CETN3O15182 167 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 AKAP3O75969 853 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 HLA-DRAP01903 254 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 CKMP06732 381 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 CCR3P51677 355 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 USP4Q13107 963 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 STKLD1Q8NE28 680 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 PDZD8Q8NEN9 1154 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 SPATA20Q8TB22 786 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 DPEP3Q9H4B8 488 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 SMYD3Q9H7B4 428 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 LMAN1LQ9HAT1 526 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 CYP3A43Q9HB55 503 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 TMEM8AQ9HCN3 771 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 GTSE1Q9NYZ3 720 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 GCNT4Q9P109 453 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
FAM49B-210ENST00000519020 MAPK8IP1Q9UQF2 711 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 PCDHGA2Q9Y5H1 932 aa17.04■□□□□ 0.32
FAM49B-210ENST00000519020 LMNAP02545 664 aaKnown RBP17.03■□□□□ 0.32
FAM49B-210ENST00000519020 EPB41P11171 864 aaKnown RBP17.03■□□□□ 0.32
FAM49B-210ENST00000519020 CHRNB1P11230 501 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 RUNX3Q13761 415 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 MTF1Q14872 753 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 ZNF77Q15935 545 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 C1orf220Q5T0J3 134 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 KRT39Q6A163 491 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 MAML2Q8IZL2 1156 aaPredicted RBP17.03■□□□□ 0.32
FAM49B-210ENST00000519020 NUP93Q8N1F7 819 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 TTC39CQ8N584 583 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 SMARCE1Q969G3 411 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 ZFYVE19Q96K21 471 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 B3GNT5Q9BYG0 378 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 SMG9Q9H0W8 520 aaKnown RBP17.03■□□□□ 0.32
FAM49B-210ENST00000519020 TRPC7Q9HCX4 862 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 DMAP1Q9NPF5 467 aaPredicted RBP17.03■□□□□ 0.32
FAM49B-210ENST00000519020 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 ARHGAP26Q9UNA1 814 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 CCL26Q9Y258 94 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
FAM49B-210ENST00000519020 SLC16A3O15427 465 aaKnown RBP17.02■□□□□ 0.32
FAM49B-210ENST00000519020 KINO60870 393 aaKnown RBP17.02■□□□□ 0.32
FAM49B-210ENST00000519020 HDCP19113 662 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 ASPAP45381 313 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 NRLP54845 237 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 CDH8P55286 799 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 LRRC63Q05C16 580 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 INCA1Q0VD86 236 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 MTAPQ13126 283 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 STIM1Q13586 685 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 SCARA5Q6ZMJ2 495 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 ASCL5Q7RTU5 278 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 FAM35AQ86V20 835 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 GPIHBP1Q8IV16 184 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 CRYBG2Q8N1P7 616 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 SPEM1Q8N4L4 309 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 NELL1Q92832 810 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 MED10Q9BTT4 135 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 ZNF518BQ9C0D4 1074 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 ZSCAN32Q9NX65 697 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 RALGAPA1Q6GYQ0 2036 aa17.02■□□□□ 0.32
FAM49B-210ENST00000519020 MYO15AQ9UKN7 3530 aa17.02■□□□□ 0.31
FAM49B-210ENST00000519020 USP34Q70CQ2 3546 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 OTOGLQ3ZCN5 2332 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 PAPSS2O95340 614 aaPredicted RBP17.01■□□□□ 0.31
FAM49B-210ENST00000519020 YWHAQP27348 245 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 PRCPP42785 496 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 RAP1GAPP47736 663 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 SLC7A9P82251 487 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 FKBP3Q00688 224 aaKnown RBP17.01■□□□□ 0.31
FAM49B-210ENST00000519020 CSTF1Q05048 431 aaKnown RBP17.01■□□□□ 0.31
FAM49B-210ENST00000519020 NR1H3Q13133 447 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 DDX42Q86XP3 938 aaKnown RBP eCLIP17.01■□□□□ 0.31
FAM49B-210ENST00000519020 CPA6Q8N4T0 437 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 ZBTB44Q8NCP5 570 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 OSCP1Q8WVF1 389 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 ATP2A3Q93084 1043 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 NIF3L1Q9GZT8 377 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 PCDHA5Q9Y5H7 936 aa17.01■□□□□ 0.31
FAM49B-210ENST00000519020 C2orf78A6NCI8 922 aa17■□□□□ 0.31
FAM49B-210ENST00000519020 ZNF840PA6NDX5 716 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms