RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ZNF354CQ86Y25 554 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 DZIP1Q86YF9 867 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 LIX1LQ8IVB5 337 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 CCDC33Q8N5R6 958 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PIK3C3Q8NEB9 887 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 IL31RAQ8NI17 732 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 CCHCR1Q8TD31 782 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 SH3RF3Q8TEJ3 882 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 SNX33Q8WV41 574 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 CCT6BQ92526 530 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 MRPS27Q92552 414 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 ESR2Q92731 530 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 RBM17Q96I25 401 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 UIMC1Q96RL1 719 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 VRK1Q99986 396 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 SYT3Q9BQG1 590 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PDCD2LQ9BRP1 358 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 UBAC1Q9BSL1 405 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 MAF1Q9H063 256 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 TNMDQ9H2S6 317 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 ZNF287Q9HBT7 754 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PCDH18Q9HCL0 1135 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PNPOQ9NVS9 261 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 ARPP21Q9UBL0 812 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 Q9UFV3 132 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 POLLQ9UGP5 575 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 CPA4Q9UI42 421 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 CDC23Q9UJX2 597 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 CROTQ9UKG9 612 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PADI4Q9UM07 663 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PCDHA7Q9UN72 937 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 QSER1Q2KHR3 1735 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 RGPD3A6NKT7 1758 aaPredicted RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 RGPD4Q7Z3J3 1758 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 GOLGA6L4A6NEF3 574 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 H0Y858 1186 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 SPTLC2O15270 562 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 NMT2O60551 498 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 CCDC192P0DO97 292 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 GAAP10253 952 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 KITP10721 976 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 PCP11498 1178 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 TSHRP16473 764 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 U2AF2P26368 475 aaKnown RBP eCLIP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 SMARCA1P28370 1054 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 CHKAP35790 457 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 ME1P48163 572 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 STAT5BP51692 787 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 MAPK10P53779 464 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 RBM6P78332 1123 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 ADAM9Q13443 819 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 STK38Q15208 465 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 TARBP2Q15633 366 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 PKN1Q16512 942 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 HS1BP3Q53T59 392 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 FAM209BQ5JX69 171 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 SPTY2D1Q68D10 685 aaPredicted RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 CPLX2Q6PUV4 134 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 OLFM4Q6UX06 510 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 CCDC73Q6ZRK6 1079 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 C11orf57Q6ZUT1 292 aaPredicted RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 Q6ZVL8 140 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 TMTC3Q6ZXV5 915 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 SAPCD2Q86UD0 394 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 STK32CQ86UX6 486 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 PQLC1Q8N2U9 271 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 NKAPQ8N5F7 415 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 TBC1D16Q8TBP0 767 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 KCNG4Q8TDN1 519 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 BRIX1Q8TDN6 353 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 NUP133Q8WUM0 1156 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 ANKS1AQ92625 1134 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 ZC3H10Q96K80 434 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 MRGPRX4Q96LA9 322 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 CRAMP1Q96RY5 1269 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 CD209Q9NNX6 404 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 SARS2Q9NP81 518 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 TLR9Q9NR96 1032 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 LANCL2Q9NS86 450 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 ATP8A2Q9NTI2 1148 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 PCMTD2Q9NV79 361 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 CALCOCO1Q9P1Z2 691 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 CDC42EP3Q9UKI2 254 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 KCNJ14Q9UNX9 436 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 SIK3Q9Y2K2 1263 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 GAKO14976 1311 aa5.37□□□□□ -1.55
CTNNA1-212ENST00000518919 A0A087WWV3 80 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 FAM237AA0A1B0GTK4 181 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 hCG_1642624A0A1W2PR95 340 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 ERICH2A1L162 156 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 ISM1B1AKI9 464 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 DDX3XO00571 662 aaKnown RBP eCLIP5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 BBOX1O75936 387 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 DEXIO95424 95 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 ADCY5O95622 1261 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 MMP1P03956 469 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 NPR1P16066 1061 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 PFKFB1P16118 471 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 PFKLP17858 780 aa5.36□□□□□ -1.55
CTNNA1-212ENST00000518919 CD53P19397 219 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms