RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 KBTBD12Q3ZCT8 623 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 APBB1IPQ7Z5R6 666 aaPredicted RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 SH3TC2Q8TF17 1288 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 CPXM1Q96SM3 734 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 PCYT2Q99447 389 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 BTBD10Q9BSF8 475 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 XYLT2Q9H1B5 865 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 DCLRE1BQ9H816 532 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 METTL5Q9NRN9 209 aaKnown RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 POLIQ9UNA4 740 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 FZD1Q9UP38 647 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 KBTBD13C9JR72 458 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 GSC2O15499 205 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 CCDC22O60826 627 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 DLDP09622 509 aaKnown RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 BGNP21810 368 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 HMGCS2P54868 508 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 TFAMQ00059 246 aaKnown RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 DPYSL3Q14195 570 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZNF699Q32M78 642 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 NPNTQ6UXI9 565 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 EP400NLQ6ZTU2 488 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 TTC7BQ86TV6 843 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 RFX6Q8HWS3 928 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 NIM1KQ8IY84 436 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 THNSL1Q8IYQ7 743 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 FBXO41Q8TF61 875 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 TTC17Q96AE7 1141 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 LBHD1Q9BQE6 289 aaPredicted RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 NIFKQ9BYG3 293 aaKnown RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZFATQ9P243 1243 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 STRIP2Q9ULQ0 834 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 RPL26L1Q9UNX3 145 aaKnown RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 HNRNPCL1O60812 293 aaKnown RBP17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 AVILO75366 819 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 PDHA1P08559 390 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 RBP3P10745 1247 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 PYGBP11216 843 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 CD19P15391 556 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 GCKP35557 465 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 PCK1P35558 622 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 AP3M2P53677 418 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 SESN3P58005 492 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 PSMC1P62191 440 aaKnown RBP17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZPBP2Q6X784 338 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 RINLQ6ZS11 566 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 HSPH1Q92598 858 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 APOPT1Q96IL0 206 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 CYTH2Q99418 400 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 FRMD8P1Q9BZ68 369 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 ADAMTS5Q9UNA0 930 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 E5RJQ4 531 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 APOC4-APOC2K7ER74 178 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 TOM1L1O75674 476 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 FAM155BO75949 473 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 APOC2P02655 101 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 ERBB2P04626 1255 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 TUBP50607 506 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 CDK16Q00536 496 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 MMRN1Q13201 1228 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 TRPC3Q13507 836 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 TARBP2Q15633 366 aaKnown RBP17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 HADHQ16836 314 aaKnown RBP17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 ACSBG2Q5FVE4 666 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 NBPF12Q5TAG4 269 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 CHSY1Q86X52 802 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 XYLT1Q86Y38 959 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 TEX9Q8N6V9 391 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 KCTD6Q8NC69 237 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 SLC44A1Q8WWI5 657 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 PRPF31Q8WWY3 499 aaKnown RBP17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 CNTN3Q9P232 1028 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 NXF1Q9UBU9 619 aaKnown RBP17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 TEX264Q9Y6I9 313 aa17.31■□□□□ 0.36
PCDHGA11-202ENST00000518882 IGKV6D-21A0A0A0MT36 114 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 ABLIM1O14639 778 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 DNAJC6O75061 913 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 HOXC6P09630 235 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 MIPP30301 263 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 YWHAEP62258 255 aaKnown RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 SLC18A2Q05940 514 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 GRIK3Q13003 919 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 GRM1Q13255 1194 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 KPNB1Q14974 876 aaKnown RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 CMPK2Q5EBM0 449 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 CDHR3Q6ZTQ4 885 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 PRPF39Q86UA1 669 aaKnown RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 SPATA18Q8TC71 538 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 FNIP1Q8TF40 1166 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 DNAJC9Q8WXX5 260 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 NSL1Q96IY1 281 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 CALN1Q9BXU9 219 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 ACAD9Q9H845 621 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 NMRK1Q9NWW6 199 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 CPSF3Q9UKF6 684 aaKnown RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 DPPA5A6NC42 116 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 GYG2O15488 501 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 KRT36O76013 467 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms