RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 HIBCHQ6NVY1 386 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-207ENST00000518569 LDLRAD3Q86YD5 345 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 SPARTQ8N0X7 666 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 CCDC33Q8N5R6 958 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 ACRBPQ8NEB7 543 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 ATRIPQ8WXE1 791 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 ATG4AQ8WYN0 398 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 FKBP10Q96AY3 582 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 FBXL20Q96IG2 436 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 ZNF668Q96K58 619 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-207ENST00000518569 PBKQ96KB5 322 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 SGCZQ96LD1 299 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 TRMT13Q9NUP7 481 aaKnown RBP4.45□□□□□ -1.7
VPS13B-207ENST00000518569 EHD3Q9NZN3 535 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 SERTAD3Q9UJW9 196 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 MRPS17Q9Y2R5 130 aaKnown RBP4.45□□□□□ -1.7
VPS13B-207ENST00000518569 H7C4K7 107 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 RAB27BO00194 218 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 PPM1DO15297 605 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 KCNQ3O43525 872 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 NCK2O43639 380 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 RRP9O43818 475 aaKnown RBP4.44□□□□□ -1.7
VPS13B-207ENST00000518569 NXPH3O95157 252 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 GCP02774 474 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 MYL4P12829 197 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 TPH1P17752 444 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 PTDSS1P48651 473 aaKnown RBP4.44□□□□□ -1.7
VPS13B-207ENST00000518569 ATXN1P54253 815 aaKnown RBP4.44□□□□□ -1.7
VPS13B-207ENST00000518569 BCAT1P54687 386 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 MRPS35P82673 323 aaKnown RBP4.44□□□□□ -1.7
VPS13B-207ENST00000518569 BMPR2Q13873 1038 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 CCNIQ14094 377 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 TXNRD1Q16881 649 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 ARL13BQ3SXY8 428 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 KLHDC7AQ5VTJ3 777 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 PLAG1Q6DJT9 500 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 MZT2AQ6P582 158 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 USP17L6PQ6QN14 398 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 TSHZ1Q6ZSZ6 1077 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 MRGPRGQ86SM5 289 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 LIX1LQ8IVB5 337 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 ABRAQ8N0Z2 381 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 SLC44A3Q8N4M1 653 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 FANCBQ8NB91 859 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 BEND2Q8NDZ0 799 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 ZNF384Q8TF68 577 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 OSCP1Q8WVF1 389 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 PDLIM2Q96JY6 352 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 PCED1AQ9H1Q7 454 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 LRIT1Q9P2V4 623 aa4.44□□□□□ -1.7
VPS13B-207ENST00000518569 CD3EAPO15446 510 aaKnown RBP4.43□□□□□ -1.7
VPS13B-207ENST00000518569 ORC4O43929 436 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 PIAS2O75928 621 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 PRKAR1BP31321 381 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 GRIA3P42263 894 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 COPAP53621 1224 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 INHBCP55103 352 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 FHL2Q14192 279 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 TBCCQ15814 346 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 PLAC9Q5JTB6 97 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 CACHD1Q5VU97 1274 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 KAZNQ674X7 775 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 MORC1Q86VD1 984 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 KRT73Q86Y46 540 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 IZUMO1Q8IYV9 350 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 SOCS4Q8WXH5 440 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 RFKQ969G6 155 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 RSPRY1Q96DX4 576 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 ZDHHC12Q96GR4 267 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 SELENOOQ9BVL4 669 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 ZCWPW1Q9H0M4 648 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 SLITRK6Q9H5Y7 841 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 GLOD4Q9HC38 313 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 HEYLQ9NQ87 328 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-207ENST00000518569 TBC1D23Q9NUY8 699 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 FNIP2Q9P278 1114 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 TBC1D30Q9Y2I9 924 aa4.43□□□□□ -1.7
VPS13B-207ENST00000518569 A0A087X1B8 175 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 ZAR1LA6NP61 321 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 VWC2LB2RUY7 222 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 ADM5C9JUS6 153 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 HNRNPDLO14979 420 aaKnown RBP4.42□□□□□ -1.7
VPS13B-207ENST00000518569 RGS10O43665 173 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 RAMP2O60895 175 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 RASAL1O95294 804 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 RHOP08100 348 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 CHRM2P08172 466 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 ZFXP17010 805 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-207ENST00000518569 EPHA3P29320 983 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 SP2Q02086 613 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 FSTL1Q12841 308 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 KLF10Q13118 480 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 OS9Q13438 667 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-207ENST00000518569 PMS2P11Q13670 270 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 ZNF169Q14929 603 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-207ENST00000518569 PTCHD3Q3KNS1 767 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 ZNF551Q7Z340 670 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-207ENST00000518569 MAVSQ7Z434 540 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 KCTD20Q7Z5Y7 419 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 CYP2W1Q8TAV3 490 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms