RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TMEM270Q6UE05 265 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 ENOSF1Q7L5Y1 443 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 UBALD2Q8IYN6 164 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 NUP93Q8N1F7 819 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 SLC44A3Q8N4M1 653 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 AOPEPQ8N6M6 819 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 ZMIZ2Q8NF64 920 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 ST13P5Q8NFI4 369 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-217ENST00000518538 ZSCAN18Q8TBC5 510 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-217ENST00000518538 EDAQ92838 391 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 SMARCD2Q92925 531 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 TASP1Q9H6P5 420 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 UBE2TQ9NPD8 197 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-217ENST00000518538 APEX2Q9UBZ4 518 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 ECI2O75521 394 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 BEST1O76090 585 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 TPM2P07951 284 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 PAEPP09466 180 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 FCARP24071 287 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 DDX6P26196 483 aaKnown RBP eCLIP23.29■■□□□ 1.32
VEGFA-217ENST00000518538 MAP3K7CLP57077 242 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 CLEC20AQ6ZU45 233 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 ANKRD20A12PQ8NF67 263 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 MRPS31Q92665 395 aaKnown RBP23.29■■□□□ 1.32
VEGFA-217ENST00000518538 ELSPBP1Q96BH3 223 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 TRPV4Q9HBA0 871 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 ZFP14Q9HCL3 533 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 KIAA1257Q9ULG3 409 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 DUSP12Q9UNI6 340 aa23.29■■□□□ 1.32
VEGFA-217ENST00000518538 GREB1Q4ZG55 1949 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 SOBPA7XYQ1 873 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 TNFRSF10BO14763 440 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 RTN3O95197 1032 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-217ENST00000518538 ZNF18P17022 549 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 NPR3P17342 541 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 SLC5A3P53794 718 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 MFAP3P55082 362 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 SGO2Q562F6 1265 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 KXD1Q9BQD3 176 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 RPP25Q9BUL9 199 aaKnown RBP23.28■■□□□ 1.32
VEGFA-217ENST00000518538 DUSP16Q9BY84 665 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 SMOC2Q9H3U7 446 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 PNPLA8Q9NP80 782 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 COMMD8Q9NX08 183 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 CNTN6Q9UQ52 1028 aa23.28■■□□□ 1.32
VEGFA-217ENST00000518538 BDP1A6H8Y1 2624 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 SMTNL1A8MU46 457 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 VDRP11473 427 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 CD19P15391 556 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 WEE1P30291 646 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 PPP3CCP48454 512 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 ZNF165P49910 485 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 ZNF132P52740 706 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 ZSCAN23Q3MJ62 389 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 TANGO2Q6ICL3 276 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 GJB7Q6PEY0 223 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 DHX40Q8IX18 779 aaKnown RBP23.27■■□□□ 1.32
VEGFA-217ENST00000518538 RBBP8NLQ8NC74 664 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-217ENST00000518538 VPS16Q9H269 839 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 HSD3B7Q9H2F3 369 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 SIX2Q9NPC8 291 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 IL37Q9NZH6 218 aa23.27■■□□□ 1.32
VEGFA-217ENST00000518538 LIMA1Q9UHB6 759 aaKnown RBP23.27■■□□□ 1.32
VEGFA-217ENST00000518538 RNF225M0QZC1 329 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-217ENST00000518538 YWHAQP27348 245 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 APBA1Q02410 837 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 SIGLEC14Q08ET2 396 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 IFRD2Q12894 506 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-217ENST00000518538 MON1AQ86VX9 555 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 ARID3BQ8IVW6 561 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-217ENST00000518538 MAB21L3Q8N8X9 362 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 ANKRD52Q8NB46 1076 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 SCAMP5Q8TAC9 235 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 E2F7Q96AV8 911 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 SLITRK1Q96PX8 696 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 SLC46A2Q9BY10 475 aa23.26■■□□□ 1.31
VEGFA-217ENST00000518538 MYO10Q9HD67 2058 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 HHLA1C9JL84 531 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 SRFP11831 508 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 CDK11BP21127 795 aaKnown RBP23.25■■□□□ 1.31
VEGFA-217ENST00000518538 COPB1P53618 953 aaKnown RBP23.25■■□□□ 1.31
VEGFA-217ENST00000518538 KCNMA1Q12791 1236 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 TAF10Q12962 218 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 GOLGA7BQ2TAP0 167 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 TXNDC8Q6A555 127 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 SMYD5Q6GMV2 418 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 CMTM8Q8IZV2 173 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 OVCA2Q8WZ82 227 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 C1QTNF1Q9BXJ1 281 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 PLA2G2FQ9BZM2 168 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 TRPM5Q9NZQ8 1165 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 TSPAN16Q9UKR8 245 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 OBSL1O75147 1896 aa23.25■■□□□ 1.31
VEGFA-217ENST00000518538 FAM92AA1XBS5 289 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 LRRC10BA6NIK2 292 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 O00370 1275 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 NARSO43776 548 aaKnown RBP23.24■■□□□ 1.31
VEGFA-217ENST00000518538 KRT5P13647 590 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 BCAT1P54687 386 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 SLC8A3P57103 927 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms