RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 SLC5A9Q2M3M2 681 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 RARS2Q5T160 578 aaKnown RBP12.52□□□□□ -0.41
AP3B1-203ENST00000517940 TAF3Q5VWG9 929 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 PMF1Q6P1K2 205 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 VSTM1Q6UX27 236 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 TC2NQ8N9U0 490 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 ANKRD52Q8NB46 1076 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 SCAMP5Q8TAC9 235 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 CPLX3Q8WVH0 158 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 SUSD6Q92537 303 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 PPP2R3CQ969Q6 453 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 C8orf48Q96LL4 319 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 SPAG5Q96R06 1193 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 DNAJC7Q99615 494 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 SFXN1Q9H9B4 322 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 DZANK1Q9NVP4 752 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 ZDHHC7Q9NXF8 308 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 IL37Q9NZH6 218 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 DNMT3BQ9UBC3 853 aaKnown RBP12.52□□□□□ -0.41
AP3B1-203ENST00000517940 PCDHGC3Q9UN70 934 aa12.52□□□□□ -0.41
AP3B1-203ENST00000517940 CCDC195A0A1B0GUA6 201 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 SLC38A8A6NNN8 435 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 M0QYV0 167 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 THAP12O43422 761 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
AP3B1-203ENST00000517940 FAM200BP0CF97 657 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 SKILP12757 684 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 CDC25BP30305 580 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 CDH5P33151 784 aaPredicted RBP12.51□□□□□ -0.41
AP3B1-203ENST00000517940 EPHA5P54756 1037 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 ADKP55263 362 aaKnown RBP12.51□□□□□ -0.41
AP3B1-203ENST00000517940 TFF2Q03403 129 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 ARID5AQ03989 594 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 MEA1Q16626 185 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 RAB41Q5JT25 222 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 PRSS36Q5K4E3 855 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 LIN9Q5TKA1 542 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 CCDC149Q6ZUS6 474 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 GAREM2Q75VX8 874 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 ZNF571Q7Z3V5 609 aaPredicted RBP12.51□□□□□ -0.41
AP3B1-203ENST00000517940 GPR149Q86SP6 731 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 PASD1Q8IV76 773 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 SCN4BQ8IWT1 228 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.51□□□□□ -0.41
AP3B1-203ENST00000517940 SECISBP2LQ93073 1101 aaKnown RBP12.51□□□□□ -0.41
AP3B1-203ENST00000517940 PSMG2Q969U7 264 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 SPATA17Q96L03 361 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 MED10Q9BTT4 135 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 TTLL2Q9BWV7 592 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 DMAP1Q9NPF5 467 aaPredicted RBP12.51□□□□□ -0.41
AP3B1-203ENST00000517940 KIAA1257Q9ULG3 409 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 NENFQ9UMX5 172 aa12.51□□□□□ -0.41
AP3B1-203ENST00000517940 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 GOLGA6L3A6NEY3 463 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 DDX3XO00571 662 aaKnown RBP eCLIP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 CYP1A1P04798 512 aaPredicted RBP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 KCNA5P22460 613 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 FECHP22830 423 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 KRT9P35527 623 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 GRIK1P39086 918 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 TUFMP49411 452 aaKnown RBP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 SLC5A3P53794 718 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 BCAT1P54687 386 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 NOMO3P69849 1222 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 CDR2Q01850 454 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 PTK2Q05397 1052 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 BST2Q10589 180 aaKnown RBP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 PTPN20Q4JDL3 420 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 RTL10Q7L3V2 364 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 DNAJB7Q7Z6W7 309 aaPredicted RBP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 PIGZQ86VD9 579 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 DNAAF5Q86Y56 855 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 C1orf131Q8NDD1 294 aaKnown RBP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 NDRG1Q92597 394 aaKnown RBP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 SYN2Q92777 582 aaPredicted RBP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 PIWIL1Q96J94 861 aaKnown RBP12.5□□□□□ -0.41
AP3B1-203ENST00000517940 ADAM7Q9H2U9 754 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 TAS2R14Q9NYV8 317 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 ARHGAP20Q9P2F6 1191 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.5□□□□□ -0.415e-7■■■□□ 19
AP3B1-203ENST00000517940 USP3Q9Y6I4 520 aa12.5□□□□□ -0.41
AP3B1-203ENST00000517940 NCANO14594 1321 aa12.49□□□□□ -0.41
AP3B1-203ENST00000517940 XPO1O14980 1071 aaKnown RBP12.49□□□□□ -0.41
AP3B1-203ENST00000517940 TRIM66O15016 1216 aa12.49□□□□□ -0.41
AP3B1-203ENST00000517940 NCK2O43639 380 aa12.49□□□□□ -0.41
AP3B1-203ENST00000517940 F11P03951 625 aa12.49□□□□□ -0.41
AP3B1-203ENST00000517940 TPM3P06753 285 aa12.49□□□□□ -0.41
AP3B1-203ENST00000517940 UNGP13051 313 aaPredicted RBP12.49□□□□□ -0.41
AP3B1-203ENST00000517940 FERP16591 822 aa12.49□□□□□ -0.41
AP3B1-203ENST00000517940 HOXB8P17481 243 aaPredicted RBP12.49□□□□□ -0.41
AP3B1-203ENST00000517940 ELF1P32519 619 aa12.49□□□□□ -0.41
AP3B1-203ENST00000517940 RGS7P49802 495 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms