RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ZFP42Q96MM3 310 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 CENPHQ9H3R5 247 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 FAM105AQ9NUU6 356 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 MYCNP04198 464 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-210ENST00000517713 ITGA8P53708 1063 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 SLC6A3Q01959 620 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 IFFO1Q0D2I5 559 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 KCNA10Q16322 511 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 DENND2CQ68D51 928 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 RPAINQ86UA6 219 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 KCTD6Q8NC69 237 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 SEMA4AQ9H3S1 761 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 ZNF148Q9UQR1 794 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 DRG1Q9Y295 367 aaKnown RBP27.87■■■□□ 2.05
COL13A1-210ENST00000517713 GRAP2O75791 330 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 RPLP2P05387 115 aaKnown RBP27.86■■■□□ 2.05
COL13A1-210ENST00000517713 NUDT17P0C025 328 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 CCDC130P13994 396 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 VPS41P49754 854 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 CAP1Q01518 475 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 MGAT3Q09327 533 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 TAZQ16635 292 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 HACE1Q8IYU2 909 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 ADGRF2Q8IZF7 708 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 ANKRD52Q8NB46 1076 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 CMASQ8NFW8 434 aaPredicted RBP27.86■■■□□ 2.05
COL13A1-210ENST00000517713 TRAIPQ9BWF2 469 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 ANAPC5Q9UJX4 755 aa27.86■■■□□ 2.05
COL13A1-210ENST00000517713 KLRC2P26717 231 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 ADORA2BP29275 332 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 BST2Q10589 180 aaKnown RBP27.85■■■□□ 2.05
COL13A1-210ENST00000517713 SH3PXD2AQ5TCZ1 1133 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 SCUBE3Q8IX30 993 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 TOP6BLQ8N6T0 577 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 BBOF1Q8ND07 529 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 KLHDC9Q8NEP7 349 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 HAUS1Q96CS2 278 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 MEIS3P2A8K0S8 358 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 BCAT1P54687 386 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 C15orf59Q2T9L4 293 aaPredicted RBP27.85■■■□□ 2.05
COL13A1-210ENST00000517713 DNAJC21Q5F1R6 531 aaKnown RBP27.85■■■□□ 2.05
COL13A1-210ENST00000517713 CCDC25Q86WR0 208 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 HSPH1Q92598 858 aa27.85■■■□□ 2.05
COL13A1-210ENST00000517713 ERICH4A6NGS2 130 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 GABBR2O75899 941 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 PRKAR2AP13861 404 aaKnown RBP27.84■■■□□ 2.05
COL13A1-210ENST00000517713 VCPP55072 806 aaKnown RBP27.84■■■□□ 2.05
COL13A1-210ENST00000517713 NOGQ13253 232 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 TAF5Q15542 800 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 ZDHHC17Q8IUH5 632 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 PKNOX2Q96KN3 472 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 GPBP1L1Q9HC44 474 aaPredicted RBP27.84■■■□□ 2.05
COL13A1-210ENST00000517713 SLC38A7Q9NVC3 462 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 DPYSL4O14531 572 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 GPR182O15218 404 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 PAPSS1O43252 624 aaPredicted RBP27.84■■■□□ 2.05
COL13A1-210ENST00000517713 CD48P09326 243 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 ELNP15502 786 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 WARSP23381 471 aaKnown RBP27.84■■■□□ 2.05
COL13A1-210ENST00000517713 SKOR1P84550 965 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 SLC29A2Q14542 456 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 KRT71Q3SY84 523 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 CCDC14Q49A88 953 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 AGBL2Q5U5Z8 902 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 ALLCQ8N6M5 410 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 CCHCR1Q8TD31 782 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 NKD2Q969F2 451 aaPredicted RBP27.84■■■□□ 2.05
COL13A1-210ENST00000517713 TNIP3Q96KP6 325 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 PEBP4Q96S96 227 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 TSPYL1Q9H0U9 437 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 AAASQ9NRG9 546 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 RNF186Q9NXI6 227 aa27.84■■■□□ 2.05
COL13A1-210ENST00000517713 CASP8AP2Q9UKL3 1982 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 CST8O60676 142 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 AOC2O75106 756 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 SHBGP04278 402 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 THPOP40225 353 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 MLH1P40692 756 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 DYNLT1P63172 113 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 SP3Q02447 781 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 OASLQ15646 514 aaKnown RBP27.83■■■□□ 2.05
COL13A1-210ENST00000517713 BBS12Q6ZW61 710 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 KHSRPQ92945 711 aaKnown RBP eCLIP27.83■■■□□ 2.05
COL13A1-210ENST00000517713 CFAP57Q96MR6 1250 aa27.83■■■□□ 2.05
COL13A1-210ENST00000517713 SHOX2O60902 331 aaPredicted RBP27.82■■■□□ 2.04
COL13A1-210ENST00000517713 NR1D1P20393 614 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 PTGISQ16647 500 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 CDO1Q16878 200 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 IZUMO3Q5VZ72 239 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 CCSAPQ6IQ19 270 aaPredicted RBP27.82■■■□□ 2.04
COL13A1-210ENST00000517713 KDM7AQ6ZMT4 941 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 PRUNE1Q86TP1 453 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 OSTM1Q86WC4 334 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 TTC13Q8NBP0 860 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 GSTCDQ8NEC7 633 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 CAPS2Q9BXY5 557 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 TSPYL2Q9H2G4 693 aaPredicted RBP27.82■■■□□ 2.04
COL13A1-210ENST00000517713 BCCIPQ9P287 314 aaKnown RBP eCLIP27.82■■■□□ 2.04
COL13A1-210ENST00000517713 GRIN2DO15399 1336 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 CYB561D2O14569 222 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms