RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 GPRIN1Q7Z2K8 1008 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 TMEM150AQ86TG1 271 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 GJD3Q8N144 294 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 KHSRPQ92945 711 aaKnown RBP eCLIP16.62■□□□□ 0.251e-6■■■■□ 20
C8orf88-201ENST00000517562 SMARCD1Q96GM5 515 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 RPP25Q9BUL9 199 aaKnown RBP16.62■□□□□ 0.25
C8orf88-201ENST00000517562 ATXN3LQ9H3M9 355 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 NLRC4Q9NPP4 1024 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
C8orf88-201ENST00000517562 SIK3Q9Y2K2 1263 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 ASB3Q9Y575 518 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 MYO16Q9Y6X6 1858 aa16.62■□□□□ 0.25
C8orf88-201ENST00000517562 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 SERPINC1P01008 464 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 F11P03951 625 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 POU2F2P09086 479 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 FAM200BP0CF97 657 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 VDRP11473 427 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 POLR2FP61218 127 aaKnown RBP16.61■□□□□ 0.25
C8orf88-201ENST00000517562 FANCCQ00597 558 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 DRAP1Q14919 205 aaPredicted RBP16.61■□□□□ 0.25
C8orf88-201ENST00000517562 SGO2Q562F6 1265 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 CLEC20AQ6ZU45 233 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 OTOP3Q7RTS5 596 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 ITIH5Q86UX2 942 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 TTC30AQ86WT1 665 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 NPAS3Q8IXF0 933 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 TTC39CQ8N584 583 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
C8orf88-201ENST00000517562 C8orf48Q96LL4 319 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 GPR88Q9GZN0 384 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 GANQ9H2C0 597 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 SMOC2Q9H3U7 446 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 PRKAG3Q9UGI9 489 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 CHORDC1Q9UHD1 332 aaPredicted RBP16.61■□□□□ 0.25
C8orf88-201ENST00000517562 CDH7Q9ULB5 785 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 NR2E1Q9Y466 385 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 ATP8B3O60423 1300 aa16.61■□□□□ 0.25
C8orf88-201ENST00000517562 HHLA1C9JL84 531 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 PIK3R2O00459 728 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 TRIM66O15016 1216 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 ABL1P00519 1130 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 CSH1P0DML2 217 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 CSH2P0DML3 217 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 LAMP2P13473 410 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 UCHL3P15374 230 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 PGFP49763 221 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 ZNF132P52740 706 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 EPHA5P54756 1037 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 GPR158Q5T848 1215 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 ARHGAP17Q68EM7 881 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 TXNDC8Q6A555 127 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 DENND5BQ6ZUT9 1274 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 RNF135Q8IUD6 432 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 NUP93Q8N1F7 819 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 NDRG1Q92597 394 aaKnown RBP16.6■□□□□ 0.25
C8orf88-201ENST00000517562 ACSF2Q96CM8 615 aaPredicted RBP16.6■□□□□ 0.25
C8orf88-201ENST00000517562 SPATA17Q96L03 361 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 DUSP16Q9BY84 665 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 SMG9Q9H0W8 520 aaKnown RBP16.6■□□□□ 0.25
C8orf88-201ENST00000517562 DMAP1Q9NPF5 467 aaPredicted RBP16.6■□□□□ 0.25
C8orf88-201ENST00000517562 TSPAN16Q9UKR8 245 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 PATJQ8NI35 1801 aa16.6■□□□□ 0.25
C8orf88-201ENST00000517562 TTC28Q96AY4 2481 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 O00370 1275 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 ZNF197O14709 1029 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 TNFRSF10BO14763 440 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 MICAL2O94851 1124 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 PAEPP09466 180 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 TRIM21P19474 475 aaKnown RBP16.59■□□□□ 0.25
C8orf88-201ENST00000517562 CLCN1P35523 988 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 RGS7P49802 495 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 ZNF445P59923 1031 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 TPM4P67936 248 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 PDE4CQ08493 712 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 TAF10Q12962 218 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 DENND1BQ6P3S1 775 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 PARM1Q6UWI2 310 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 SHC3Q92529 594 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 CYP2S1Q96SQ9 504 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 KXD1Q9BQD3 176 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
C8orf88-201ENST00000517562 SLC46A2Q9BY10 475 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 PLA2G2FQ9BZM2 168 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 SLITRK6Q9H5Y7 841 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 CSNK1G1Q9HCP0 422 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.59■□□□□ 0.25
C8orf88-201ENST00000517562 IFNKQ9P0W0 207 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 CNTN6Q9UQ52 1028 aa16.59■□□□□ 0.25
C8orf88-201ENST00000517562 VCANP13611 3396 aa16.58■□□□□ 0.25
C8orf88-201ENST00000517562 THAP12O43422 761 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 TADA3O75528 432 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 NPR3P17342 541 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 YWHAQP27348 245 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 VIPR2P41587 438 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 SLC5A3P53794 718 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 NR1I3Q14994 352 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 CNGA2Q16280 664 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 FILIP1LQ4L180 1135 aa16.58■□□□□ 0.24
C8orf88-201ENST00000517562 FAM78AQ5JUQ0 283 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms