RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PLIN4Q96Q06 1357 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 NDNQ99608 321 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 TDRD3Q9H7E2 651 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 GPRC5CQ9NQ84 441 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PICK1Q9NRD5 415 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 THAP1Q9NVV9 213 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 RHBDL2Q9NX52 303 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 LOC100653049A0A140TA62 436 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 CLRN2A0PK11 232 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 SPDYE5A6NIY4 337 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 CRCPO75575 148 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 KRT34O76011 436 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 OAS1P00973 400 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 GRK2P25098 689 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 GTF2BQ00403 316 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 FAAP100Q0VG06 881 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 MAMLD1Q13495 774 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 RPS6KA2Q15349 733 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 CYTH1Q15438 398 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ASRGL1Q7L266 308 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 C4orf19Q8IY42 314 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 CCNYQ8ND76 341 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 OR6Y1Q8NGX8 325 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 RNF217Q8TC41 542 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 CCT7Q99832 543 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 XAB2Q9HCS7 855 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 R3HDM2Q9Y2K5 976 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 MYH2Q9UKX2 1941 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 KLHL33A6NCF5 533 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 M0QYV0 167 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 LYNP07948 512 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 VIL1P09327 827 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ATP6V1B1P15313 513 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 SDC4P31431 198 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 CHN2P52757 468 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ZBTB17Q13105 803 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 FLOT2Q14254 428 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 MAPRE2Q15555 327 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 SYCP2LQ5T4T6 812 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ANKS1BQ7Z6G8 1248 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 DHDDSQ86SQ9 333 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 EGFL6Q8IUX8 553 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 LARGE2Q8N3Y3 721 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 SLC25A41Q8N5S1 370 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 RFWD2Q8NHY2 731 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 C7orf43Q8WVR3 580 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 EZH1Q92800 747 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 NRBF2Q96F24 287 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 KREMEN1Q96MU8 473 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 KIFC3Q9BVG8 833 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 NIF3L1Q9GZT8 377 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 RPF1Q9H9Y2 349 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 NOCTQ9UK39 431 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 DNAJC16Q9Y2G8 782 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF711Q9Y462 761 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 COL1A1P02452 1464 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 MROH7Q68CQ1 1323 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 FAM237BA0A1B0GVD1 139 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 TISP43B9A030 160 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 LINGO3P0C6S8 592 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 GLRA2P23416 452 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 POLD1P28340 1107 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 RAB27AP51159 221 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 HDAC4P56524 1084 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 PRPSAP1Q14558 356 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 PPP1R15BQ5SWA1 713 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 B3GNT6Q6ZMB0 384 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 MAP4K3Q8IVH8 894 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ULK2Q8IYT8 1036 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 NLGN1Q8N2Q7 840 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 SPIRE2Q8WWL2 714 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 JDP2Q8WYK2 163 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 EME1Q96AY2 570 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 VPS33BQ9H267 617 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 SMYD2Q9NRG4 433 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 TBC1D23Q9NUY8 699 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ADA2Q9NZK5 511 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 DCDC2Q9UHG0 476 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 TMCO1Q9UM00 188 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 AIM2O14862 343 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 TNFAIP8O95379 198 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ADRB2P07550 413 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 THRAP10827 490 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 CHRNB2P17787 502 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ITGA9Q13797 1035 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 TKFCQ3LXA3 575 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 LIN52Q52LA3 116 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 SLC27A3Q5K4L6 730 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF772Q68DY9 489 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 C16orf87Q6PH81 154 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 CNBD2Q96M20 576 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 MRPL4Q9BYD3 311 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 FHDC1Q9C0D6 1143 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 NRDE2Q9H7Z3 1164 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 RAVER2Q9HCJ3 691 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 DDX4Q9NQI0 724 aaKnown RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 FBXO6Q9NRD1 293 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-203ENST00000517490 MRGBPQ9NV56 204 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 FETUBQ9UGM5 382 aa6.93□□□□□ -1.3
CPNE3-203ENST00000517490 KBTBD13C9JR72 458 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms