RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 TROAPQ12815 778 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 SNX30Q5VWJ9 437 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 PRPF39Q86UA1 669 aaKnown RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZNF786Q8N393 782 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 EMILIN2Q9BXX0 1053 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 STK33Q9BYT3 514 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 RXFP1Q9HBX9 757 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 DKK3Q9UBP4 350 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ADGRA3Q8IWK6 1321 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 DDTLA6NHG4 134 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 PJA2O43164 708 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ALDH2P05091 517 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 LCP1P13796 627 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ATP4AP20648 1035 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 PAX3P23760 479 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 KLRK1P26718 216 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 PTPN4P29074 926 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ACOT2P49753 483 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 EPHB3P54753 998 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 TMEM62Q0P6H9 643 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 SH3KBP1Q96B97 665 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 C9orf72Q96LT7 481 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 PAIP1Q9H074 479 aaKnown RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 SCN3BQ9NY72 215 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 GOLGA8RI6L899 631 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 RTN2O75298 545 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 RHOBTB3O94955 611 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 OCM2P0CE71 109 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 OCMP0CE72 109 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 FMR1Q06787 632 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ARHGEF7Q14155 803 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 OASLQ15646 514 aaKnown RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRMT5Q32P41 509 aaKnown RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 HEATR4Q86WZ0 1026 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 RMDN1Q96DB5 314 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZFRQ96KR1 1074 aaKnown RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 KLHL4Q9C0H6 718 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 PCDHB2Q9Y5E7 798 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 LZTS3O60299 673 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 CPA2P48052 419 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ARL4DP49703 201 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 SULT1E1P49888 294 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 COPAP53621 1224 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ATN1P54259 1190 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ABCE1P61221 599 aaKnown RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 TMC7Q7Z402 723 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 TMA16Q96EY4 203 aaKnown RBP12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 HPDLQ96IR7 371 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 TEX12Q9BXU0 123 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 MAD2L2Q9UI95 211 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 MKL2Q9ULH7 1088 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 GLTPD2A6NH11 291 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 VWA5AO00534 786 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 FOXN1O15353 648 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 CA12O43570 354 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 RNASEH1O60930 286 aaKnown RBP12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 B3GAT3O94766 335 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 THP07101 528 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 C4BPBP20851 252 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 KLRC1P26715 233 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC34A1Q06495 639 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 LVRNQ6Q4G3 990 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 LPCAT2Q7L5N7 544 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 SCUBE1Q8IWY4 988 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 FBXO16Q8IX29 292 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 C4orf19Q8IY42 314 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 TMEM199Q8N511 208 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 SYTL5Q8TDW5 730 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 JADE3Q92613 823 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 ULK4Q96C45 1275 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRPM5Q9NZQ8 1165 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 APEX2Q9UBZ4 518 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 FAM153AQ9UHL3 310 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 CORO1CQ9ULV4 474 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 APOL1O14791 398 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 AIM2O14862 343 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 GYPCP04921 128 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 PRLRP16471 622 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 ROR1Q01973 937 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 PLA2G4FQ68DD2 849 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 MPZL3Q6UWV2 235 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 ANKRD23Q86SG2 305 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 PRUNE1Q86TP1 453 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 CAVIN3Q969G5 261 aa12.71□□□□□ -0.37
PCDHGA6-201ENST00000517434 ANGPT2O15123 496 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 F9P00740 461 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 PGK2P07205 417 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 ADORA2AP29274 412 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 LHX1P48742 406 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 ARSEP51690 589 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 CDH6P55285 790 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 UBE3AQ05086 875 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms