RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 TARM1B6A8C7 271 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 ZKSCAN1P17029 563 aaPredicted RBP6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 CTGFP29279 349 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 PRKAG1P54619 331 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 SOX10P56693 466 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 EEFSECP57772 596 aaKnown RBP6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 RPS16P62249 146 aaKnown RBP6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 CYP4F2P78329 520 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 FOXF2Q12947 444 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 CNGA2Q16280 664 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 PCID2Q5JVF3 399 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 NAPRTQ6XQN6 538 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 ZNF782Q6ZMW2 699 aaPredicted RBP6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 OSCP1Q8WVF1 389 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 SOCS4Q8WXH5 440 aa6.41□□□□□ -1.38
SCARNA1-201ENST00000517138 H7C4K7 107 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 PYCARD-AS1I3L0S3 204 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 PPM1GO15355 546 aaPredicted RBP6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 FRS3O43559 492 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 ZBED1O96006 694 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 XRCC6P12956 609 aaKnown RBP eCLIP6.4□□□□□ -1.384e-8■■□□□ 12.1
SCARNA1-201ENST00000517138 MYF5P13349 255 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 CYP1B1Q16678 543 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 GFOD2Q3B7J2 385 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 ANKRD16Q6P6B7 361 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 Q6ZWC4 215 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 IZUMO1Q8IYV9 350 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 DNAJB14Q8TBM8 379 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 NMD3Q96D46 503 aaKnown RBP6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 LENG8Q96PV6 779 aaPredicted RBP6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 C17orf80Q9BSJ5 609 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 APOL5Q9BWW9 433 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 STK31Q9BXU1 1019 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 AS3MTQ9HBK9 375 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 A1CFQ9NQ94 594 aaKnown RBP6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 DNMT3BQ9UBC3 853 aaKnown RBP6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 SH2B3Q9UQQ2 575 aa6.4□□□□□ -1.38
SCARNA1-201ENST00000517138 QSOX1O00391 747 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 MAP4K4O95819 1239 aaPredicted RBP6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 ONECUT2O95948 504 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 IL1R1P14778 569 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 ATF3P18847 181 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 PEX2P28328 305 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 ITGA8P53708 1063 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 AARS2Q5JTZ9 985 aaKnown RBP6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 CEP85Q6P2H3 762 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 CAND1Q86VP6 1230 aaKnown RBP6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 FANCBQ8NB91 859 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 HASPINQ8TF76 798 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 SPSB4Q96A44 273 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 APIPQ96GX9 242 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 SUCLG2Q96I99 432 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 FSD1LQ9BXM9 530 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 ADAMTS5Q9UNA0 930 aa6.39□□□□□ -1.39
SCARNA1-201ENST00000517138 ISM1B1AKI9 464 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 SMIM22K7EJ46 135 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 HRGP04196 525 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 RHCEP18577 417 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 FPR3P25089 353 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 CACNB3P54284 484 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 RHDQ02161 417 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 PROSER3Q2NL68 480 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 DARS2Q6PI48 645 aaKnown RBP6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 PARS2Q7L3T8 475 aaKnown RBP6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 SLC29A4Q7RTT9 530 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 WDR53Q7Z5U6 358 aaPredicted RBP6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 SRRM1Q8IYB3 904 aaKnown RBP6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 PRR25Q96S07 402 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 XPNPEP3Q9NQH7 507 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 AFF4Q9UHB7 1163 aaKnown RBP6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 CCNL1Q9UK58 526 aaPredicted RBP6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 TNFRSF18Q9Y5U5 241 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 CDY1Q9Y6F8 540 aa6.38□□□□□ -1.39
SCARNA1-201ENST00000517138 GOLGA6CA6NDK9 693 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 GOLGA6BA6NDN3 693 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 MBD3L4A6NDZ8 208 aaPredicted RBP6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 MBD3L3A6NE82 208 aaPredicted RBP6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 F8W8V4 182 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 AP4M1O00189 453 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 GOLIM4O00461 696 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 SRGAP2O75044 1071 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 RASSF9O75901 435 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 GOLGA6DP0CG33 693 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 SATB1Q01826 763 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 SRSF4Q08170 494 aaKnown RBP6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 SEMA5AQ13591 1074 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 POLD3Q15054 466 aaPredicted RBP6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 CACHD1Q5VU97 1274 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 ZNF66Q6ZN08 573 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 SRGAP1Q7Z6B7 1085 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 CYP2W1Q8TAV3 490 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 TBC1D5Q92609 795 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 ZBTB45Q96K62 511 aaPredicted RBP6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 GOLGA6AQ9NYA3 693 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 LPAR3Q9UBY5 353 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 OGDHLQ9ULD0 1010 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 GABRQQ9UN88 632 aa6.37□□□□□ -1.39
SCARNA1-201ENST00000517138 COL3A1P02461 1466 aaPredicted RBP6.36□□□□□ -1.39
SCARNA1-201ENST00000517138 LINC01548A6NM66 108 aa6.36□□□□□ -1.39
SCARNA1-201ENST00000517138 TISP43B9A030 160 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms