RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 TGFB1P01137 390 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 TFRCP02786 760 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 HPXP02790 462 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MPOP05164 745 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 CLEC3BP05452 202 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 CSH1P0DML2 217 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 CSH2P0DML3 217 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 NR2F1P10589 423 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 PIM1P11309 404 aaPredicted RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 UBL4AP11441 157 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 XRCC6P12956 609 aaKnown RBP eCLIP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 LAMP2P13473 410 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 CPA1P15085 419 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FOSL1P15407 271 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 GYPEP15421 78 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SDHBP21912 280 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MUTP22033 750 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 PSMA4P25789 261 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SLC5A2P31639 672 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ACSL1P33121 698 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 TRHRP34981 398 aaPredicted RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 GGT5P36269 586 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 HADHAP40939 763 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 RGS2P41220 211 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 PAFAH1B1P43034 410 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 PTDSS1P48651 473 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MCM2P49736 904 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ZNF135P52742 658 aaPredicted RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 PTTG1IPP53801 180 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 WNT3P56703 355 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 NLRP5P59047 1200 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ERVFRD-1P60508 538 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 RPP30P78346 268 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MC1RQ01726 317 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 CALD1Q05682 793 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ZP2Q05996 745 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 CHAF1BQ13112 559 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 DUSP8Q13202 625 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MPP3Q13368 585 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MAMLD1Q13495 774 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ATP1A4Q13733 1029 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SCARB2Q14108 478 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 RAB3GAP1Q15042 981 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 RASA2Q15283 850 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SEC23BQ15437 767 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 TBCCQ15814 346 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 INSCQ1MX18 579 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 GALNTL6Q49A17 601 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 DUSP28Q4G0W2 176 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 TBC1D10BQ4KMP7 808 aaPredicted RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 PLA1AQ53H76 456 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FAM47AQ5JRC9 791 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MFSD14BQ5SR56 506 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MANEALQ5VSG8 457 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FYB2Q5VWT5 728 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 KLHL24Q6TFL4 600 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ATF7IPQ6VMQ6 1270 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 RPTNQ6XPR3 784 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ZNF365Q70YC5 407 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 KDELC2Q7Z4H8 507 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 KCTD20Q7Z5Y7 419 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FRMD5Q7Z6J6 570 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ZC3H18Q86VM9 953 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 GAS2L3Q86XJ1 694 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ZDHHC14Q8IZN3 488 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 NDUFAF2Q8N183 169 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 PLA2G15Q8NCC3 412 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 DNERQ8NFT8 737 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SLC22A17Q8WUG5 538 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 USP6NLQ92738 828 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 STAMQ92783 540 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 GFM2Q969S9 779 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 GRAMD1AQ96CP6 724 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FAM120BQ96EK7 910 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MISP3Q96FF7 219 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 CALML4Q96GE6 196 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FEM1CQ96JP0 617 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SPATA17Q96L03 361 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 TMEM209Q96SK2 561 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MESP1Q9BRJ9 268 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FUZQ9BT04 418 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 NDC1Q9BTX1 674 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 MRPL9Q9BYD2 267 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 TINAGL1Q9GZM7 467 aaPredicted RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 KATNBL1Q9H079 304 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 OR10A4Q9H209 315 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 KCNH6Q9H252 994 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SLC25A32Q9H2D1 315 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FAM83DQ9H4H8 585 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 C19orf44Q9H6X5 657 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ZWILCHQ9H900 591 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 BRF2Q9HAW0 419 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 FSCN3Q9NQT6 498 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 ZSCAN32Q9NX65 697 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 NDUFAF4Q9P032 175 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 PIM2Q9P1W9 311 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SLC23A1Q9UHI7 598 aa2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 SMG5Q9UPR3 1016 aaKnown RBP2.83□□□□□ -1.96
SCARNA3-201ENST00000517097 CNTN6Q9UQ52 1028 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms