RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 TRAPPC9Q96Q05 1148 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 GPHA2Q96T91 129 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 MYOCQ99972 504 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 VKORC1Q9BQB6 163 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 SYT3Q9BQG1 590 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 REEP2Q9BRK0 252 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 PAAF1Q9BRP4 392 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 CHCHD6Q9BRQ6 235 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 GPR63Q9BZJ6 419 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 MCOLN1Q9GZU1 580 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 TMEM168Q9H0V1 697 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 SLC25A32Q9H2D1 315 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 CCDC68Q9H2F9 335 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 EPB41L4BQ9H329 900 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 NELFAQ9H3P2 528 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 ABHD16BQ9H3Z7 469 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 SERHL2Q9H4I8 314 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 PRDM13Q9H4Q3 707 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 TAF1DQ9H5J8 278 aaPredicted RBP1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 GCM1Q9NP62 436 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 TRIM36Q9NQ86 728 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 PCMTD2Q9NV79 361 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 FBXO34Q9NWN3 711 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 IRAK4Q9NWZ3 460 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 ETAA1Q9NY74 926 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 FAM53CQ9NYF3 392 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 NKIRAS2Q9NYR9 191 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 PLA2G3Q9NZ20 509 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 DNAJB11Q9UBS4 358 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 AASSQ9UDR5 926 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 SLC45A2Q9UMX9 530 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 DAPP1Q9UN19 280 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 AGAP1Q9UPQ3 857 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 HPSEQ9Y251 543 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 ATP11BQ9Y2G3 1177 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 DERAQ9Y315 318 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 CYP46A1Q9Y6A2 500 aa1.5□□□□□ -2.17
RN7SKP88-201ENST00000516847 SPATA31A3Q5VYP0 1347 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 PASKQ96RG2 1323 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 PNMA6EA0A0J9YXQ4 647 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 CCDC195A0A1B0GUA6 201 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 A0A1W2PPH5 198 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 CCDC78A2IDD5 438 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 PI4KAP2A4QPH2 592 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZNF503-AS2A6NEH8 195 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 FAM90A20PA6NIJ5 464 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 MBD3L5A6NJ08 208 aaPredicted RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 PRR5-ARHGAP8B1AHC4 643 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 DIRC3C9JPN6 131 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 E7EVH7 732 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 H7C4K7 107 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 J3KTA2 159 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 MATN2O00339 956 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 POLRMTO00411 1230 aaKnown RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 DCLK1O15075 740 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 SEPT4O43236 478 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 TRIM13O60858 407 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 CBFA2T3O75081 653 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ADAMTS4O75173 837 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 GUCY1B2O75343 617 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 USP1O94782 785 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 GFPT2O94808 682 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 IPO13O94829 963 aaKnown RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 KIF20AO95235 890 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 F9P00740 461 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 CYP1A1P04798 512 aaPredicted RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 RPN1P04843 607 aaKnown RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 HLA-DOAP06340 250 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 INHBBP09529 407 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 HNRNPA1P09651 372 aaKnown RBP eCLIP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZNF888P0CJ79 500 aaPredicted RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZSCAN22P10073 491 aaPredicted RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 GYS1P13807 737 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 JUPP14923 745 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 JUNBP17275 347 aaPredicted RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ALOX12P18054 663 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 KCNA3P22001 575 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 RBL1P28749 1068 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 SERPINA4P29622 427 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 HOXD12P35452 270 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 PXNP49023 591 aaPredicted RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 TOB1P50616 345 aaPredicted RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 EPHB3P54753 998 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 DRG2P55039 364 aaKnown RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 RRADP55042 308 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ARF3P61204 181 aaPredicted RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 RAP2BP61225 183 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 DLG4P78352 724 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ARF1P84077 181 aaKnown RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 TIAL1Q01085 375 aaKnown RBP eCLIP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 KRT17Q04695 432 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 SLFN5Q08AF3 891 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZNF844Q08AG5 666 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 TBL3Q12788 808 aaKnown RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 MYO1EQ12965 1108 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 RIN1Q13671 783 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 CCNIQ14094 377 aa1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 EIF4A2Q14240 407 aaKnown RBP1.49□□□□□ -2.17
RN7SKP88-201ENST00000516847 ERV3-1Q14264 604 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms