RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TPCN1Q9ULQ1 816 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 WBP11Q9Y2W2 641 aaKnown RBP3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 PCDHA2Q9Y5H9 948 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 KCNMB2Q9Y691 235 aa3.57□□□□□ -1.84
SCARNA13-201ENST00000516672 KIF26BQ2KJY2 2108 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 MYH4Q9Y623 1939 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 MYO5AQ9Y4I1 1855 aaKnown RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 MTMR11A4FU01 709 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 ZSCAN5CA6NGD5 496 aaPredicted RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 MASP2O00187 686 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 SRGAP3O43295 1099 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 HMMRO75330 724 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 PRAMEF12O95522 483 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 ARAFP10398 606 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 TGFB3P10600 412 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 HGFP14210 728 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 MARK3P27448 753 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 C21orf59P57076 290 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 RPL10AP62906 217 aaKnown RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 SPIRE1Q08AE8 756 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 PCOLCEQ15113 449 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 PSMD5Q16401 504 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 DEFB113Q30KQ7 82 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 HSF5Q4G112 596 aaPredicted RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 CRB2Q5IJ48 1285 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 C10orf62Q5T681 223 aaPredicted RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 EMC10Q5UCC4 262 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 SLFN13Q68D06 897 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 FUT10Q6P4F1 479 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 KCNV1Q6PIU1 500 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 TREML4Q6UXN2 200 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 RBM44Q6ZP01 1051 aaKnown RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 TMC6Q7Z403 805 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 CAMKMTQ7Z624 323 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 ERC1Q8IUD2 1116 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 ITPRIPQ8IWB1 547 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 CISD2Q8N5K1 135 aaKnown RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 ST6GALNAC3Q8NDV1 305 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 EXOC6Q8TAG9 804 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 URGCPQ8TCY9 931 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 MTFMTQ96DP5 389 aaKnown RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 SCARF2Q96GP6 870 aaPredicted RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 OSMRQ99650 979 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 PKP2Q99959 881 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 ZFYVE21Q9BQ24 234 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 ENKD1Q9H0I2 346 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 SLC6A17Q9H1V8 727 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 WSB2Q9NYS7 404 aaPredicted RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 ZBTB47Q9UFB7 747 aaPredicted RBP3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 BRPF3Q9ULD4 1205 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 MAPK8IP1Q9UQF2 711 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 PCDHA8Q9Y5H6 950 aa3.56□□□□□ -1.84
SCARNA13-201ENST00000516672 TNRC6AQ8NDV7 1962 aaKnown RBP3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 SMIM35A0A1B0GVV1 85 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 A0A1W2PQ27 194 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 A0A1W2PQ64 194 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 A0A1W2PQC6 194 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 A0A1W2PRU2 124 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 ARHGEF37A1IGU5 675 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 RRN3P2A6NIE6 340 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 TRIM38O00635 465 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 SCAMP1O15126 338 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 YKT6O15498 198 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 TRAK2O60296 914 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 RAB11FIP3O75154 756 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 LRIG2O94898 1065 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 GP1BAP07359 652 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 FAM157CP0CG43 387 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 TYRP1P17643 537 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 PDCP20941 246 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 ARID4AP29374 1257 aaPredicted RBP3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 ATP1A2P50993 1020 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 COPB1P53618 953 aaKnown RBP3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 DUSP4Q13115 394 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 RESTQ13127 1097 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 RAB33AQ14088 237 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 FGL2Q14314 439 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 CHRFAM7AQ494W8 412 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 ATP1A1-AS1Q5TC04 95 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 IQCEQ6IPM2 695 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 DUS1LQ6P1R4 473 aaKnown RBP3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 CEP85Q6P2H3 762 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 TICAM2Q86XR7 235 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 KSR1Q8IVT5 923 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 SFTPA1Q8IWL2 248 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 ELOA2Q8IYF1 753 aaPredicted RBP3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 ADGRG2Q8IZP9 1017 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 LNX1Q8TBB1 728 aaPredicted RBP3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 PANK1Q8TE04 598 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 TRAPPC12Q8WVT3 735 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 NKD1Q969G9 470 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 CCDC120Q96HB5 630 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 ZNF512BQ96KM6 892 aaPredicted RBP3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 RMDN3Q96TC7 470 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 LYSTQ99698 3801 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 EPAS1Q99814 870 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 RANBP17Q9H2T7 1088 aaKnown RBP3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 OSGEPQ9NPF4 335 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 RTN4Q9NQC3 1192 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 220.1 ms