RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 COPS2P61201 443 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 MRPS25P82663 173 aaKnown RBP21.14■□□□□ 0.98
TRIO-223ENST00000515710 FAAP100Q0VG06 881 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 ARCQ7LC44 396 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 COLGALT2Q8IYK4 626 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 PRELID2Q8N945 189 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 MYCBPAPQ8TBZ2 947 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 RXFP2Q8WXD0 754 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 KCTD13Q8WZ19 329 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 B3GNT5Q9BYG0 378 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 TBC1D13Q9NVG8 400 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 ZNF446Q9NWS9 450 aa21.14■□□□□ 0.98
TRIO-223ENST00000515710 DPYSL4O14531 572 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 LRCH4O75427 683 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 GLI1P08151 1106 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 PDGFRAP16234 1089 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 TLE2Q04725 743 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 RNASELQ05823 741 aaKnown RBP21.14■□□□□ 0.97
TRIO-223ENST00000515710 DHX34Q14147 1143 aaKnown RBP21.14■□□□□ 0.97
TRIO-223ENST00000515710 ZNF280BQ86YH2 543 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 CCDC50Q8IVM0 306 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 SCUBE3Q8IX30 993 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 ABI1Q8IZP0 508 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 THEM5Q8N1Q8 247 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 NCAPGQ9BPX3 1015 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 AMACRQ9UHK6 382 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 LRFN2Q9ULH4 789 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 PCDHB8Q9UN66 801 aa21.14■□□□□ 0.97
TRIO-223ENST00000515710 CENPFP49454 3210 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 HOXA2O43364 376 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 SEC31AO94979 1220 aaKnown RBP21.13■□□□□ 0.97
TRIO-223ENST00000515710 FAM200BP0CF97 657 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 RARAP10276 462 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 DESP17661 470 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 PCK1P35558 622 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 GJC1P36383 396 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 GUCY2DQ02846 1103 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 SIX1Q15475 284 aaPredicted RBP21.13■□□□□ 0.97
TRIO-223ENST00000515710 PAN2Q504Q3 1202 aaKnown RBP21.13■□□□□ 0.97
TRIO-223ENST00000515710 ODF2Q5BJF6 829 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 SLC26A9Q7LBE3 791 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 ZDHHC14Q8IZN3 488 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 ARFGAP1Q8N6T3 406 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 ANKLE1Q8NAG6 615 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 MAGOHBQ96A72 148 aaKnown RBP21.13■□□□□ 0.97
TRIO-223ENST00000515710 EPB41L5Q9HCM4 733 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 PCNTO95613 3336 aa21.13■□□□□ 0.97
TRIO-223ENST00000515710 MYBPHLA2RUH7 354 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 FAM187AA6NFU0 413 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 I3L4J1 428 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 CLDN5O00501 218 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 KRT1P04264 644 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 TCF4P15884 667 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 SLC25A11Q02978 314 aaKnown RBP21.12■□□□□ 0.97
TRIO-223ENST00000515710 SMC1AQ14683 1233 aaKnown RBP21.12■□□□□ 0.97
TRIO-223ENST00000515710 PKN2Q16513 984 aaKnown RBP21.12■□□□□ 0.97
TRIO-223ENST00000515710 TRIM60Q495X7 471 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 ZFYVE27Q5T4F4 411 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 PIGZQ86VD9 579 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 C12orf50Q8NA57 414 aaPredicted RBP21.12■□□□□ 0.97
TRIO-223ENST00000515710 KHSRPQ92945 711 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRIO-223ENST00000515710 ARMC5Q96C12 935 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 RTP3Q9BQQ7 232 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 OSBPL8Q9BZF1 889 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 UBXN6Q9BZV1 441 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 TCRBV7S2A1N4TA0A589 114 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 BHMG1C9JSJ3 638 aaPredicted RBP21.12■□□□□ 0.97
TRIO-223ENST00000515710 LCP1P13796 627 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 ATP13A4Q4VNC1 1196 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 EFHC1Q5JVL4 640 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 OVOS1Q6IE37 1185 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 FAM171BQ6P995 826 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 EIF1ADQ8N9N8 165 aaKnown RBP21.12■□□□□ 0.97
TRIO-223ENST00000515710 HASPINQ8TF76 798 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 PCED1BQ96HM7 432 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 SCLYQ96I15 445 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 PIWIL1Q96J94 861 aaKnown RBP21.12■□□□□ 0.97
TRIO-223ENST00000515710 LRRC19Q9H756 370 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 HOMER3Q9NSC5 361 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 PCYOX1Q9UHG3 505 aa21.12■□□□□ 0.97
TRIO-223ENST00000515710 TRAPPC3O43617 180 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 RALAP11233 206 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 PTPN7P35236 360 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 FLT3P36888 993 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 OR1G1P47890 313 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 CCL23P55773 120 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 INTS6LQ5JSJ4 861 aaKnown RBP21.11■□□□□ 0.97
TRIO-223ENST00000515710 CLEC20AQ6ZU45 233 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 FAM35AQ86V20 835 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 RNF25Q96BH1 459 aaPredicted RBP21.11■□□□□ 0.97
TRIO-223ENST00000515710 CASD1Q96PB1 797 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 SLITRK1Q96PX8 696 aa21.11■□□□□ 0.97
TRIO-223ENST00000515710 ITGB1P05556 798 aa21.1■□□□□ 0.97
TRIO-223ENST00000515710 FNTAP49354 379 aa21.1■□□□□ 0.97
TRIO-223ENST00000515710 DR1Q01658 176 aa21.1■□□□□ 0.97
TRIO-223ENST00000515710 MAPRE1Q15691 268 aaKnown RBP21.1■□□□□ 0.97
TRIO-223ENST00000515710 CCDC14Q49A88 953 aa21.1■□□□□ 0.97
TRIO-223ENST00000515710 TRNP1Q6NT89 227 aa21.1■□□□□ 0.97
TRIO-223ENST00000515710 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.1■□□□□ 0.973e-6■■■■■ 50.8
TRIO-223ENST00000515710 LRRC4Q9HBW1 653 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms