RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 HESX1Q9UBX0 185 aa27.5■■□□□ 1.99
DDR1-279ENST00000515529 ZMYM5Q9UJ78 669 aa27.5■■□□□ 1.99
DDR1-279ENST00000515529 NUMBLQ9Y6R0 609 aa27.5■■□□□ 1.99
DDR1-279ENST00000515529 DOCK8Q8NF50 2099 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 ANHXE9PGG2 379 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 CAVIN2O95810 425 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 VDRP11473 427 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 ACO1P21399 889 aaKnown RBP27.49■■□□□ 1.99
DDR1-279ENST00000515529 DDX6P26196 483 aaKnown RBP eCLIP27.49■■□□□ 1.99
DDR1-279ENST00000515529 COPB1P53618 953 aaKnown RBP27.49■■□□□ 1.99
DDR1-279ENST00000515529 TPM4P67936 248 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 TDGQ13569 410 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 ARHGAP17Q68EM7 881 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 ZSCAN18Q8TBC5 510 aaPredicted RBP27.49■■□□□ 1.99
DDR1-279ENST00000515529 KREMEN1Q96MU8 473 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 SLITRK1Q96PX8 696 aa27.49■■□□□ 1.99
DDR1-279ENST00000515529 LIMA1Q9UHB6 759 aaKnown RBP27.49■■□□□ 1.99
DDR1-279ENST00000515529 NRG2O14511 850 aaPredicted RBP27.48■■□□□ 1.99
DDR1-279ENST00000515529 F11P03951 625 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 NPR3P17342 541 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 YWHAQP27348 245 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 USP8P40818 1118 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 ARHGAP44Q17R89 818 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 PARM1Q6UWI2 310 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 DHX40Q8IX18 779 aaKnown RBP27.48■■□□□ 1.99
DDR1-279ENST00000515529 ST13P5Q8NFI4 369 aaPredicted RBP27.48■■□□□ 1.99
DDR1-279ENST00000515529 RSAD2Q8WXG1 361 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 SMARCD2Q92925 531 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 DUSP16Q9BY84 665 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 TASP1Q9H6P5 420 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 ZFP14Q9HCL3 533 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 CSNK1G1Q9HCP0 422 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 TRPM5Q9NZQ8 1165 aa27.48■■□□□ 1.99
DDR1-279ENST00000515529 ZNF18P17022 549 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 SLC5A3P53794 718 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 USP46P62068 366 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 GOLGA7BQ2TAP0 167 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 FAM78AQ5JUQ0 283 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 STXBP5Q5T5C0 1151 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 GJB7Q6PEY0 223 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 CLEC20AQ6ZU45 233 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 UBALD2Q8IYN6 164 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 FGF14Q92915 247 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 KHSRPQ92945 711 aaKnown RBP eCLIP27.47■■□□□ 1.99
DDR1-279ENST00000515529 FBXO32Q969P5 355 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 ZSWIM3Q96MP5 696 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 ASB16Q96NS5 453 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 KXD1Q9BQD3 176 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 TTLL2Q9BWV7 592 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 LSM14BQ9BX40 385 aaKnown RBP27.47■■□□□ 1.99
DDR1-279ENST00000515529 TRPC7Q9HCX4 862 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 COMMD8Q9NX08 183 aa27.47■■□□□ 1.99
DDR1-279ENST00000515529 PI4K2BG5E9Z4 385 aa27.46■■□□□ 1.99
DDR1-279ENST00000515529 DPYSL4O14531 572 aa27.46■■□□□ 1.99
DDR1-279ENST00000515529 PPP3CCP48454 512 aa27.46■■□□□ 1.99
DDR1-279ENST00000515529 APBA1Q02410 837 aa27.46■■□□□ 1.99
DDR1-279ENST00000515529 ZMIZ2Q8NF64 920 aa27.46■■□□□ 1.99
DDR1-279ENST00000515529 FBXO44Q9H4M3 255 aa27.46■■□□□ 1.99
DDR1-279ENST00000515529 DNAJC12Q9UKB3 198 aa27.46■■□□□ 1.99
DDR1-279ENST00000515529 ECI2O75521 394 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 BEST1O76090 585 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 AVPR1AP37288 418 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 BCAT1P54687 386 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 ZXDAP98168 799 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 TAF10Q12962 218 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 STILQ15468 1287 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 TMEM150AQ86TG1 271 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 SLC44A3Q8N4M1 653 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 MAB21L3Q8N8X9 362 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 ANKRD52Q8NB46 1076 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 PDZD8Q8NEN9 1154 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 E2F7Q96AV8 911 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 PCMTD1Q96MG8 357 aaPredicted RBP27.45■■□□□ 1.98
DDR1-279ENST00000515529 PNPLA8Q9NP80 782 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 TSPAN16Q9UKR8 245 aa27.45■■□□□ 1.98
DDR1-279ENST00000515529 SOBPA7XYQ1 873 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 LGALS16A8MUM7 142 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 ABL1P00519 1130 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 RFX1P22670 979 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 TXNDC8Q6A555 127 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 SCAMP5Q8TAC9 235 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 EDAQ92838 391 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 ELSPBP1Q96BH3 223 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 CBX8Q9HC52 389 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 SIX2Q9NPC8 291 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 BDP1A6H8Y1 2624 aa27.44■■□□□ 1.98
DDR1-279ENST00000515529 MYH10P35580 1976 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 RNF225M0QZC1 329 aaPredicted RBP27.43■■□□□ 1.98
DDR1-279ENST00000515529 TNFRSF10BO14763 440 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 TADA3O75528 432 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 ATP1A3P13637 1013 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 BRD2P25440 801 aaKnown RBP27.43■■□□□ 1.98
DDR1-279ENST00000515529 PDE6CP51160 858 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 ZNF132P52740 706 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 UBXN1Q04323 297 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 BST2Q10589 180 aaKnown RBP27.43■■□□□ 1.98
DDR1-279ENST00000515529 KCNMA1Q12791 1236 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 RAPGEF1Q13905 1077 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 TANGO2Q6ICL3 276 aa27.43■■□□□ 1.98
DDR1-279ENST00000515529 MON1AQ86VX9 555 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms