RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 RABGAP1LQ5R372 815 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 GPATCH4Q5T3I0 446 aaKnown RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 SH2D5Q6ZV89 423 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 C12orf56Q8IXR9 622 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 PALM2Q8IXS6 379 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 PPIL6Q8IXY8 311 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 RILPQ96NA2 401 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 FHDC1Q9C0D6 1143 aaPredicted RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 FAM96AQ9H5X1 160 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 SF3B1O75533 1304 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 SDR42E2A6NKP2 422 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 BOLA2-SMG1P6H3BVE0 249 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 COPEO14579 308 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ITM2AO43736 263 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ITGAVP06756 1048 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ZNF12P17014 697 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ALDH18A1P54886 795 aaKnown RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 AQP5P55064 265 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ALCAMQ13740 583 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 HSF5Q4G112 596 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 HP1BP3Q5SSJ5 553 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 RWDD4Q6NW29 188 aaKnown RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 POTEHQ6S545 545 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ANKMY2Q8IV38 441 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ARID3BQ8IVW6 561 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 PQLC1Q8N2U9 271 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ADCY4Q8NFM4 1077 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ACAP3Q96P50 834 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 FIZ1Q96SL8 496 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 KCNK16Q96T55 309 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 CCT7Q99832 543 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 EIF2AQ9BY44 585 aaKnown RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MTMR4Q9NYA4 1195 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 UBAP1Q9NZ09 502 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 BCAP29Q9UHQ4 241 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 CDH22Q9UJ99 828 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 SNCAIPQ9Y6H5 919 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ARFGEF1Q9Y6D6 1849 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 CAPN8A6NHC0 703 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 WTIPA6NIX2 430 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 SFI1A8K8P3 1242 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 SPAG6O75602 509 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 SLITRK3O94933 977 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 CRTAMO95727 393 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MYL4P12829 197 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ATP6V1B1P15313 513 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ZNF23P17027 643 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 HOXA10P31260 410 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 PPARGP37231 505 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MXI1P50539 228 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ERFP50548 548 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MCCD1P59942 119 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 TMPRSS15P98073 1019 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MYBPC1Q00872 1141 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 PPP3CAQ08209 521 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 NFX1Q12986 1120 aaKnown RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 PTK7Q13308 1070 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 PRR16Q569H4 304 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 LIN9Q5TKA1 542 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MAPKAPK5Q8IW41 473 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 CRYGNQ8WXF5 182 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 KREMEN1Q96MU8 473 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 TCHPQ9BT92 498 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 KLC2Q9H0B6 622 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 C12orf65Q9H3J6 166 aaKnown RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 SMYD3Q9H7B4 428 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 TMEM206Q9H813 350 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MRPL47Q9HD33 250 aaKnown RBP13.35□□□□□ -0.27
SMAD1-215ENST00000515385 TBC1D23Q9NUY8 699 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 MKS1Q9NXB0 559 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 RRN3Q9NYV6 651 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 SIRPGQ9P1W8 387 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 DNPEPQ9ULA0 475 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 POMPQ9Y244 141 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 AP4B1Q9Y6B7 739 aa13.35□□□□□ -0.27
SMAD1-215ENST00000515385 E5RJQ4 531 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 C6orf222P0C671 652 aaPredicted RBP13.34□□□□□ -0.27
SMAD1-215ENST00000515385 POLR2MP0CAP2 368 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 SSTR1P30872 391 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 PTPN7P35236 360 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 HALP42357 657 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 GCLMP48507 274 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 NEK2P51955 445 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 SNRPFP62306 86 aaKnown RBP13.34□□□□□ -0.27
SMAD1-215ENST00000515385 BST1Q10588 318 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 EFTUD2Q15029 972 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMAD1-215ENST00000515385 ZFP1Q6P2D0 407 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 TMEM53Q6P2H8 277 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms