RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TRIM55Q9BYV6 548 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 ACAD9Q9H845 621 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 ATP8A2Q9NTI2 1148 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 DLL3Q9NYJ7 618 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 NYAP2Q9P242 653 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 ADD3Q9UEY8 706 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 FEM1BQ9UK73 627 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 CDC42EP3Q9UKI2 254 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 SRPK3Q9UPE1 567 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 MRVI1Q9Y6F6 885 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 DNAH14Q0VDD8 3507 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 MYH8P13535 1937 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 TANC1Q9C0D5 1861 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 MYO5AQ9Y4I1 1855 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 ATRXP46100 2492 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 COL4A6Q14031 1691 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 EP300Q09472 2414 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 RALGAPA2Q2PPJ7 1873 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 NAV1Q8NEY1 1877 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 B4DLN1 442 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 WNT9AO14904 365 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 NBNO60934 754 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 ABHD16AO95870 558 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 MYL3P08590 195 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 CKBP12277 381 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 AKR1B1P15121 316 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 BMPR1AP36894 532 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 GRIA2P42262 883 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 ADCY7P51828 1080 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 MRPL12P52815 198 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 PPP2R2AP63151 447 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 CNTN2Q02246 1040 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 HYAL1Q12794 435 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 RAB33AQ14088 237 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 TTF1Q15361 905 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 PTPN21Q16825 1174 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 C12orf60Q5U649 245 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 ANKS3Q6ZW76 656 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 USP53Q70EK8 1073 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 LRRC8DQ7L1W4 858 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 AMOTL1Q8IY63 956 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 IFNL3Q8IZI9 196 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 LRRC47Q8N1G4 583 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 PROKR1Q8TCW9 393 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 CHURC1Q8WUH1 139 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 SSH1Q8WYL5 1049 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 P2RX5Q93086 422 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 RMDN1Q96DB5 314 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 MPHOSPH6Q99547 160 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 MLST8Q9BVC4 326 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 GPR87Q9BY21 358 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 WDR11Q9BZH6 1224 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 CD244Q9BZW8 370 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 OR10A5Q9H207 317 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 PIH1D3Q9NQM4 214 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 PDGFCQ9NRA1 345 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 SIRPGQ9P1W8 387 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 MICAL3Q7RTP6 2002 aa4.31□□□□□ -1.72
PDLIM5-218ENST00000513341 NLRC5Q86WI3 1866 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 NCOR2Q9Y618 2525 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 GOLGA6L6A8MZA4 724 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 AGRPO00253 132 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 KLF4O43474 513 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 PLA2G6O60733 806 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 MPIG6BO95866 241 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 CASTP20810 708 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 CLK3P49761 638 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 RRP1P56182 461 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 SESN2P58004 480 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 CD83Q01151 205 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 GPR19Q15760 415 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 FIGNQ5HY92 759 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 HECTD2Q5U5R9 776 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 NAIF1Q69YI7 327 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 GRAMD4Q6IC98 578 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 FAM43BQ6ZT52 329 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 C16orf86Q6ZW13 317 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 TMCO2Q7Z6W1 182 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 EFHBQ8N7U6 833 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 SMRP1Q8NCR6 262 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 DBF4BQ8NFT6 615 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 SCFD2Q8WU76 684 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 ARHGAP45Q92619 1136 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 IL17RAQ96F46 866 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 YME1L1Q96TA2 773 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 IER2Q9BTL4 223 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 AMNQ9BXJ7 453 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 API5Q9BZZ5 524 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 MAF1Q9H063 256 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 SLC6A15Q9H2J7 730 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 RAVER2Q9HCJ3 691 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 A1CFQ9NQ94 594 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 CYP39A1Q9NYL5 469 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 PNMA2Q9UL42 364 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 FPGT-TNNI3KV9GXZ4 949 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 MYO7AQ13402 2215 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 MYO10Q9HD67 2058 aa4.3□□□□□ -1.72
PDLIM5-218ENST00000513341 ZFHX4Q86UP3 3567 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 CAND2O75155 1236 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms