RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 PTK2Q05397 1052 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 DUSP4Q13115 394 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 PLD1Q13393 1074 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 ADAM15Q13444 863 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 COL19A1Q14993 1142 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 MEA1Q16626 185 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 CTC1Q2NKJ3 1217 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 MGAT5BQ3V5L5 792 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 PPM1LQ5SGD2 360 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 PPP1R26Q5T8A7 1209 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 LLGL2Q6P1M3 1020 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 TMC6Q7Z403 805 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 FUKQ8N0W3 1084 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 TTC9BQ8N6N2 239 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 C12orf29Q8N999 325 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 ATAD1Q8NBU5 361 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 SLC7A14Q8TBB6 771 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 SLC2A14Q8TDB8 520 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 EPS8L1Q8TE68 723 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 PABPC5Q96DU9 382 aaKnown RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 CEP295NLQ96MC4 621 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 SEPT5Q99719 369 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 HNRNPABQ99729 332 aaKnown RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 LPIN3Q9BQK8 851 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 B3GNT5Q9BYG0 378 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 ZNF518BQ9C0D4 1074 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 IGFLR1Q9H665 355 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 DMAP1Q9NPF5 467 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 KRT82Q9NSB4 513 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 ZDHHC7Q9NXF8 308 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 HESX1Q9UBX0 185 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 TSPAN16Q9UKR8 245 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 CAPN11Q9UMQ6 739 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 LUC7L2Q9Y383 392 aaKnown RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 YIPF1Q9Y548 306 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 INSL5Q9Y5Q6 135 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 EYSQ5T1H1 3165 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 CLDN5O00501 218 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 LINC01565O15544 149 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 THAP12O43422 761 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 MFAP3LO75121 409 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 TBX10O75333 385 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 AP1G2O75843 785 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 SEC24AO95486 1093 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 ADCY5O95622 1261 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 LRG1P02750 347 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CFHP08603 1231 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 POU2F2P09086 479 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 HNRNPA1P09651 372 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 SPATA31D3P0C874 917 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 SETSIPP0DME0 302 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 HAPLN1P10915 354 aaPredicted RBP8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CYP11B1P15538 503 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 NPR3P17342 541 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 HOXB8P17481 243 aaPredicted RBP8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CYP2F1P24903 491 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 BRD2P25440 801 aaKnown RBP8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 ANXA13P27216 316 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 ADORA2BP29275 332 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CASP14P31944 242 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 ALDH1A3P47895 512 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 MRE11P49959 708 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 SLC8A3P57103 927 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 RPL10AP62906 217 aaKnown RBP8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 ZBED6P86452 979 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 BST2Q10589 180 aaKnown RBP8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 VEPH1Q14D04 833 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CNGA2Q16280 664 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 GOLGA7BQ2TAP0 167 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 SFMBT2Q5VUG0 894 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CLEC20AQ6ZU45 233 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 SPATA31D4Q6ZUB0 917 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 PAQR9Q6ZVX9 377 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 SLC47A2Q86VL8 602 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 ZNF677Q86XU0 584 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CNGA4Q8IV77 575 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 ANKRD52Q8NB46 1076 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 VN1R2Q8NFZ6 395 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 ZNF606Q8WXB4 792 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 TFAP2BQ92481 460 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 RHOBTB2Q9BYZ6 727 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 PNPLA8Q9NP80 782 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CLDND1Q9NY35 253 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 AIPL1Q9NZN9 384 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 SLC27A5Q9Y2P5 690 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 CEP83Q9Y592 693 aa8.03□□□□□ -1.12
HMGXB3-204ENST00000513318 PRUNE2Q8WUY3 3088 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 GOLGA6L6A8MZA4 724 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 F8VP50 259 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 M0QYV0 167 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 XYLBO75191 536 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 RFPL2O75678 378 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 MICAL2O94851 1124 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 PAPLNO95428 1278 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ATF6P18850 670 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 KRT9P35527 623 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms