RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CPEB3Q8NE35 698 aaKnown RBP4.99□□□□□ -1.61
HTT-210ENST00000512909 EXTL1Q92935 676 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 LRRC46Q96FV0 321 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 ZC3H10Q96K80 434 aaKnown RBP4.99□□□□□ -1.61
HTT-210ENST00000512909 MSLNLQ96KJ4 702 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 NELL2Q99435 816 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 ZNF341Q9BYN7 854 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 MAGEB5Q9BZ81 275 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 NRDE2Q9H7Z3 1164 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 CD248Q9HCU0 757 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 HEYLQ9NQ87 328 aaPredicted RBP4.99□□□□□ -1.61
HTT-210ENST00000512909 JAG2Q9Y219 1238 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 MED14O60244 1454 aa4.99□□□□□ -1.61
HTT-210ENST00000512909 RPRD2Q5VT52 1461 aaKnown RBP4.99□□□□□ -1.61
HTT-210ENST00000512909 ADGRF5Q8IZF2 1346 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 LRRC7Q96NW7 1537 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 A0A087WWL8 130 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 A0A0B4J269 797 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 PRSS29PA6NIE9 313 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 E9PLN8 166 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 ORC4O43929 436 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 MT-ND5P03915 603 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 CFIP05156 583 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 MYL4P12829 197 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 ACVR2AP27037 513 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 IL1R2P27930 398 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 HTR3AP46098 478 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 ALDH5A1P51649 535 aaPredicted RBP4.98□□□□□ -1.61
HTT-210ENST00000512909 ITGA8P53708 1063 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 LILRA4P59901 499 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 OCA2Q04671 838 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 TUBB3Q13509 450 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 ARHGEF7Q14155 803 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 CSRP2Q16527 193 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 CD300EQ496F6 205 aaPredicted RBP4.98□□□□□ -1.61
HTT-210ENST00000512909 C10orf62Q5T681 223 aaPredicted RBP4.98□□□□□ -1.61
HTT-210ENST00000512909 C1QL3Q5VWW1 255 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 TAF2Q6P1X5 1199 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 TOGARAM2Q6ZUX3 1019 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 MICALCLQ6ZW33 695 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 SLC15A3Q8IY34 581 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 SPICE1Q8N0Z3 855 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 LCORLQ8N3X6 602 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 FANCBQ8NB91 859 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 BRI3BPQ8WY22 251 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 HAS1Q92839 578 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 BOD1Q96IK1 185 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 C20orf173Q96LM9 149 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 VKORC1Q9BQB6 163 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 DPH1Q9BZG8 443 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 TPSD1Q9BZJ3 242 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 CASS4Q9NQ75 786 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 TRMT13Q9NUP7 481 aaKnown RBP4.98□□□□□ -1.61
HTT-210ENST00000512909 STK32BQ9NY57 414 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 COL20A1Q9P218 1284 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 TAGLN3Q9UI15 199 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 MID2Q9UJV3 735 aa4.98□□□□□ -1.61
HTT-210ENST00000512909 HFM1A2PYH4 1435 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 CCDC144AA2RUR9 1427 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 IQGAP1P46940 1657 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 ZNF142P52746 1687 aaPredicted RBP4.97□□□□□ -1.61
HTT-210ENST00000512909 SYNMO15061 1565 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 ARHGAP23Q9P227 1491 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 METP08581 1390 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 RAB3GAP2Q9H2M9 1393 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 hCG_1642624A0A1W2PR95 340 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 AQP7P3A6NL99 342 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 TMEM233B4DJY2 109 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 PIAS2O75928 621 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 TXNP10599 105 aaKnown RBP4.97□□□□□ -1.61
HTT-210ENST00000512909 HARSP12081 509 aaKnown RBP4.97□□□□□ -1.61
HTT-210ENST00000512909 ABCB4P21439 1286 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 TM4SF4P48230 202 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 PTTG1IPP53801 180 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 TNFAIP2Q03169 654 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 DYRK1AQ13627 763 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 HLXQ14774 488 aaPredicted RBP4.97□□□□□ -1.61
HTT-210ENST00000512909 PTPAQ15257 358 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 GEN1Q17RS7 908 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 SPDYAQ5MJ70 313 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 LY6G5CQ5SRR4 150 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 ARHGAP40Q5TG30 622 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 KLHDC7AQ5VTJ3 777 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 RRAGBQ5VZM2 374 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 XRRA1Q6P2D8 792 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 PRRT2Q7Z6L0 340 aaPredicted RBP4.97□□□□□ -1.61
HTT-210ENST00000512909 TTC30AQ86WT1 665 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 SH3RF3Q8TEJ3 882 aaPredicted RBP4.97□□□□□ -1.61
HTT-210ENST00000512909 PPP2R3CQ969Q6 453 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 MUL1Q969V5 352 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 PTCD3Q96EY7 689 aaKnown RBP4.97□□□□□ -1.61
HTT-210ENST00000512909 SGCZQ96LD1 299 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 PTDSS2Q9BVG9 487 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 COLEC11Q9BWP8 271 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 SMURF2Q9HAU4 748 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 INTS13Q9NVM9 706 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 HSFX1Q9UBD0 423 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 CCNL1Q9UK58 526 aaPredicted RBP4.97□□□□□ -1.61
HTT-210ENST00000512909 TSC22D4Q9Y3Q8 395 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms