RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 MPOP05164 745 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 CKMP06732 381 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 KCNE1P15382 129 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 NTSR1P30989 418 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 LIFRP42702 1097 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 GABREP78334 506 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 KDSRQ06136 332 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 PPP2R5CQ13362 524 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 IGFBP7Q16270 282 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 INF2Q27J81 1249 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 ARL13BQ3SXY8 428 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 MGAT5BQ3V5L5 792 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 USP37Q86T82 979 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
CLCN3-208ENST00000512813 MICU3Q86XE3 530 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 PHTF2Q8N3S3 785 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 SH3RF2Q8TEC5 729 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 IPO4Q8TEX9 1081 aaKnown RBP10.17□□□□□ -0.78
CLCN3-208ENST00000512813 GIPC2Q8TF65 315 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 TMEM87BQ96K49 555 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 MRGPRX1Q96LB2 322 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 ZMAT2Q96NC0 199 aaKnown RBP10.17□□□□□ -0.78
CLCN3-208ENST00000512813 SLC22A12Q96S37 553 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 MMS19Q96T76 1030 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 ARHGAP9Q9BRR9 750 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 GPR174Q9BXC1 333 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 POLR3FQ9H1D9 316 aaPredicted RBP10.17□□□□□ -0.78
CLCN3-208ENST00000512813 IL25Q9H293 177 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 THSD1Q9NS62 852 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 PCDHB1Q9Y5F3 818 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 TIMM13Q9Y5L4 95 aaPredicted RBP10.17□□□□□ -0.78
CLCN3-208ENST00000512813 TRAV19A0A0A6YYK7 116 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 A0A1B0GTL3 188 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 BTBD18B2RXH4 712 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 LAD1O00515 517 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 ZBTB39O15060 712 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 PRC1O43663 620 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 DFNA5O60443 496 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 EDN1P05305 212 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 FAM87AP0C7U9 286 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 ATP2B1P20020 1258 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 TNFSF9P41273 254 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 GRIA4P48058 902 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 LSSP48449 732 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 AARSP49588 968 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLCN3-208ENST00000512813 YARSP54577 528 aaKnown RBP10.16□□□□□ -0.78
CLCN3-208ENST00000512813 INSM1Q01101 510 aaPredicted RBP10.16□□□□□ -0.78
CLCN3-208ENST00000512813 IL9RQ01113 521 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 TEAD4Q15561 434 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 ZBTB8OSQ8IWT0 167 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 SPATA20Q8TB22 786 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 C18orf25Q96B23 403 aaPredicted RBP10.16□□□□□ -0.78
CLCN3-208ENST00000512813 CCDC97Q96F63 343 aaPredicted RBP10.16□□□□□ -0.78
CLCN3-208ENST00000512813 SLC6A17Q9H1V8 727 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 OSGEPQ9NPF4 335 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 RBM28Q9NW13 759 aaKnown RBP10.16□□□□□ -0.78
CLCN3-208ENST00000512813 USP36Q9P275 1121 aaKnown RBP10.16□□□□□ -0.78
CLCN3-208ENST00000512813 ADAMTS1Q9UHI8 967 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 VAV3Q9UKW4 847 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 HCN2Q9UL51 889 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 SLCO1B1Q9Y6L6 691 aa10.16□□□□□ -0.78
CLCN3-208ENST00000512813 A0A1B0GTQ1 180 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 ACKR2O00590 384 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 KCNK3O14649 394 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 GNA11P29992 359 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 GRM5P41594 1212 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 WASP42768 502 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 CTSKP43235 329 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 ASIC1P78348 528 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 DMP1Q13316 513 aaPredicted RBP10.15□□□□□ -0.78
CLCN3-208ENST00000512813 DHCR24Q15392 516 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 ZC2HC1CQ53FD0 456 aaPredicted RBP10.15□□□□□ -0.78
CLCN3-208ENST00000512813 OVOS1Q6IE37 1185 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 ARMCX5Q6P1M9 558 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 IGF2-ASQ6U949 168 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 KIAA1324Q6UXG2 1013 aaKnown RBP10.15□□□□□ -0.78
CLCN3-208ENST00000512813 KDM7AQ6ZMT4 941 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 MIB1Q86YT6 1006 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 KIAA1958Q8N8K9 716 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 KRI1Q8N9T8 703 aaKnown RBP10.15□□□□□ -0.78
CLCN3-208ENST00000512813 CCDC12Q8WUD4 166 aaPredicted RBP10.15□□□□□ -0.78
CLCN3-208ENST00000512813 EXTL1Q92935 676 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 CYP2S1Q96SQ9 504 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 CCDC113Q9H0I3 377 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 C2orf40Q9H1Z8 148 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 POLR1BQ9H9Y6 1135 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 TRPC7Q9HCX4 862 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 CNTN3Q9P232 1028 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 ARHGAP26Q9UNA1 814 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 USP20Q9Y2K6 914 aa10.15□□□□□ -0.78
CLCN3-208ENST00000512813 TP53BP1Q12888 1972 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-208ENST00000512813 CYP3A7-CYP3A51PA0A087WV96 503 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 TDP2O95551 362 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 MT-CO3P00414 261 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 HAPLN1P10915 354 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-208ENST00000512813 CYP3A7P24462 503 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 GRNP28799 593 aaKnown RBP10.14□□□□□ -0.79
CLCN3-208ENST00000512813 HSPA4P34932 840 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 PFKFB3Q16875 520 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-208ENST00000512813 SGO2Q562F6 1265 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms