RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 MPLP40238 635 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 PREPLQ4J6C6 727 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-216ENST00000512683 TRAPPC11Q7Z392 1133 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 HSCBQ8IWL3 235 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 RPLP0P6Q8NHW5 317 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 RIN3Q8TB24 985 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 KCNV2Q8TDN2 545 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 DUSP9Q99956 384 aaKnown RBP13.42□□□□□ -0.26
VEGFA-216ENST00000512683 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 BCLAF3A2AJT9 711 aaKnown RBP13.41□□□□□ -0.26
VEGFA-216ENST00000512683 LEFTY2O00292 366 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 CUTAO60888 179 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 ALDH1A2O94788 518 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 CAVIN2O95810 425 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 OLFM2O95897 454 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 F13A1P00488 732 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 LMO2P25791 158 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 PMLP29590 882 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 DPP6P42658 865 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 PXNP49023 591 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-216ENST00000512683 DGKEP52429 567 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 BYSLQ13895 437 aaKnown RBP13.41□□□□□ -0.26
VEGFA-216ENST00000512683 PSMD6Q15008 389 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 SF3A2Q15428 464 aaKnown RBP13.41□□□□□ -0.26
VEGFA-216ENST00000512683 FOXD4L6Q3SYB3 417 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-216ENST00000512683 SPDYCQ5MJ68 293 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 TDRD10Q5VZ19 366 aaKnown RBP13.41□□□□□ -0.26
VEGFA-216ENST00000512683 FOXD4L3Q6VB84 417 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-216ENST00000512683 IQUBQ8NA54 791 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 GLIS3Q8NEA6 775 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 TSTD1Q8NFU3 115 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 USP33Q8TEY7 942 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 KBTBD7Q8WVZ9 684 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 OVCA2Q8WZ82 227 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 OTUB2Q96DC9 234 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 FNBP1Q96RU3 617 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 SLC22A12Q96S37 553 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 MMS19Q96T76 1030 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 LINC00597Q9H2U6 94 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 SNX25Q9H3E2 840 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 MAGEF1Q9HAY2 307 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 COMMD8Q9NX08 183 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 HSPBP1Q9NZL4 362 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 TBC1D14Q9P2M4 693 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 WNT6Q9Y6F9 365 aa13.41□□□□□ -0.26
VEGFA-216ENST00000512683 CNOT1A5YKK6 2376 aaKnown RBP13.4□□□□□ -0.26
VEGFA-216ENST00000512683 C2orf78A6NCI8 922 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 TULP1O00294 542 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-216ENST00000512683 BDNFP23560 247 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 HOXD13P35453 343 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 CDR1P51861 262 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 AP3M2P53677 418 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 ST3GAL2Q16842 350 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 DAB2IPQ5VWQ8 1189 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 RNF43Q68DV7 783 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 HS2ST1Q7LGA3 356 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 RASSF3Q86WH2 238 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 PDZD8Q8NEN9 1154 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 OR5B17Q8NGF7 314 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 HPS3Q969F9 1004 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 MYLPFQ96A32 169 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 DHX58Q96C10 678 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 PCED1BQ96HM7 432 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 CNOT6LQ96LI5 555 aaKnown RBP13.4□□□□□ -0.26
VEGFA-216ENST00000512683 SLITRK1Q96PX8 696 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 HHIPQ96QV1 700 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 C7orf25Q9BPX7 421 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 ELOVL4Q9GZR5 314 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 CRTAC1Q9NQ79 661 aa13.4□□□□□ -0.26
VEGFA-216ENST00000512683 UBE4BO95155 1302 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 E2F8A0AVK6 867 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 K7EQS6 105 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 KHNYNO15037 678 aaKnown RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 ATP2C2O75185 946 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 KCNK5O95279 499 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 CST3P01034 146 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 HSP90AA1P07900 732 aaKnown RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 TNNI1P19237 187 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 OPRD1P41143 372 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 TNFRSF4P43489 277 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 CYP27A1Q02318 531 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 SNRNP35Q16560 246 aaKnown RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 SNX30Q5VWJ9 437 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 EPM2AIP1Q7L775 607 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 C12orf56Q8IXR9 622 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 STKLD1Q8NE28 680 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms