RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 TGS1Q96RS0 853 aaKnown RBP10.13□□□□□ -0.79
SNF8-211ENST00000512243 TMEM8AQ9HCN3 771 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 FANCLQ9NW38 375 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 CACNG4Q9UBN1 327 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 DNAJB4Q9UDY4 337 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 RNF112Q9ULX5 631 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 FAN1Q9Y2M0 1017 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 PCDHB12Q9Y5F1 795 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 TRANK1O15050 2925 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 HYAL3O43820 417 aaPredicted RBP10.12□□□□□ -0.79
SNF8-211ENST00000512243 AFPP02771 609 aaKnown RBP10.12□□□□□ -0.79
SNF8-211ENST00000512243 ALDH2P05091 517 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 ITGB3P05106 788 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 GALTP07902 379 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 ZNF18P17022 549 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 PBX3P40426 434 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 GCLMP48507 274 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 CLCNKBP51801 687 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 RBP5P82980 135 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 TRPC3Q13507 836 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 KRT31Q15323 416 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 SPRED3Q2MJR0 410 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 C1orf220Q5T0J3 134 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 TDRD10Q5VZ19 366 aaKnown RBP10.12□□□□□ -0.79
SNF8-211ENST00000512243 C9orf57Q5W0N0 161 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 ANKRD34AQ69YU3 496 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 KRT39Q6A163 491 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 FDX2Q6P4F2 183 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 TRAPPC11Q7Z392 1133 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 RNF214Q8ND24 703 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 SLC35C1Q96A29 364 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 FAM84AQ96KN4 292 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 FAM129BQ96TA1 746 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 TUBGCP2Q9BSJ2 902 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 COLEC11Q9BWP8 271 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 LIN7BQ9HAP6 207 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 SLC28A3Q9HAS3 691 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 TAB2Q9NYJ8 693 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 MYO7AQ13402 2215 aa10.12□□□□□ -0.79
SNF8-211ENST00000512243 A0A096LPE4 126 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 LOC100289279A0A1B0GTE1 492 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 A0A1W2PPZ6 126 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 ANO9A1A5B4 782 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 HMX2A2RU54 273 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 NT5C1B-RDH14C9J2C7 533 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 TMEM189-UBE2V1I3L0A0 370 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 NRP1O14786 923 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 B3GAT3O94766 335 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 HLA-DRAP01903 254 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 C4BPAP04003 597 aaKnown RBP10.11□□□□□ -0.79
SNF8-211ENST00000512243 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 PNPLA4P41247 253 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 GRIA4P48058 902 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 FMO5P49326 533 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 TAF6P49848 677 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 ERVK-21P61565 698 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 GSTM4Q03013 218 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 TAP1Q03518 808 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 PPP3CAQ08209 521 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 CETN1Q12798 172 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 MYO1EQ12965 1108 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 UPP1Q16831 310 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 ZACNQ401N2 412 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 SV2CQ496J9 727 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 CBWD6Q4V339 395 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 CBWD3Q5JTY5 395 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 CBWD5Q5RIA9 395 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 DCLRE1AQ6PJP8 1040 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 CCNJLQ8IV13 435 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 TRIM42Q8IWZ5 723 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 SLC39A11Q8N1S5 342 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 LRRC52Q8N7C0 313 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 CCDC150Q8NCX0 1101 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 HASPINQ8TF76 798 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 RABGGTAQ92696 567 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 TMEM169Q96HH4 297 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 TCF12Q99081 682 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 PAAF1Q9BRP4 392 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 C17orf80Q9BSJ5 609 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 IMPG2Q9BZV3 1241 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 HSD3B7Q9H2F3 369 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 C7orf69Q9H7B7 122 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 MARCH5Q9NX47 278 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 SPG21Q9NZD8 308 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 SIX4Q9UIU6 781 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 ADAM28Q9UKQ2 775 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 MTUS1Q9ULD2 1270 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 AGAP1Q9UPQ3 857 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 NUB1Q9Y5A7 615 aa10.11□□□□□ -0.79
SNF8-211ENST00000512243 SF3B1O75533 1304 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNF8-211ENST00000512243 MYH10P35580 1976 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 TMEM265A0A087WTH1 108 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 ARHGEF37A1IGU5 675 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 PIRO00625 290 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 PPEF2O14830 753 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 P4HA2O15460 535 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 TADA2AO75478 443 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 DLGAP3O95886 979 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 IGLV1-40P01703 118 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 RB1P06400 928 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms