RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 IKBKEQ14164 716 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ZNF268Q14587 947 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 MAPRE1Q15691 268 aaKnown RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CLLU1OSQ5K130 101 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 NAA35Q5VZE5 725 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ARCQ7LC44 396 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 PRICKLE2Q7Z3G6 844 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ZNF572Q7Z3I7 529 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 UBE2Q1Q7Z7E8 422 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 PDCL2Q8N4E4 241 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CEP112Q8N8E3 955 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 C3orf20Q8ND61 904 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 C1orf131Q8NDD1 294 aaKnown RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 MNS1Q8NEH6 495 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 MYRIPQ8NFW9 859 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ZNF564Q8TBZ8 553 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 FNIP1Q8TF40 1166 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 TFAP2BQ92481 460 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 LPPQ93052 612 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 SENP8Q96LD8 212 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 HEXIM2Q96MH2 286 aaKnown RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 NCAPGQ9BPX3 1015 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CXCL16Q9H2A7 254 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ABCB6Q9NP58 842 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ACP6Q9NPH0 428 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 RNF19AQ9NV58 838 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 MIOSQ9NXC5 875 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ADAM22Q9P0K1 906 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CTTNBP2NLQ9P2B4 639 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 STK39Q9UEW8 545 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CDH9Q9ULB4 789 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 LRFN2Q9ULH4 789 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CCDC66A2RUB6 948 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 SYN3O14994 580 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 MAN1A2O60476 641 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 PALMO75781 387 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 URI1O94763 535 aaPredicted RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 B3GAT3O94766 335 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 TIMP1P01033 207 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 GPC1P35052 558 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 GPD2P43304 727 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ACADSBP45954 432 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 NOP2P46087 812 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 RAP1GAPP47736 663 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 CLCNKBP51801 687 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 EPHA4P54764 986 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 NAP1L1P55209 391 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 CDH8P55286 799 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 SLC8A3P57103 927 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 PLCB3Q01970 1234 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 BST2Q10589 180 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ACAP1Q15027 740 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 SCARA3Q6AZY7 606 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ERICH1Q86X53 443 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 METTL23Q86XA0 190 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ANKMY2Q8IV38 441 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 COLGALT2Q8IYK4 626 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 LRRC43Q8N309 656 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 TMEM199Q8N511 208 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 NIPA2Q8N8Q9 360 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ANKRD52Q8NB46 1076 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 RNF169Q8NCN4 708 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 B3GALNT2Q8NCR0 500 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 OR6B3Q8NGW1 331 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 IPO4Q8TEX9 1081 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 DIS3LQ8TF46 1054 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 PBXIP1Q96AQ6 731 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ARHGEF26Q96DR7 871 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 HES6Q96HZ4 224 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 PAWRQ96IZ0 340 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 PBKQ96KB5 322 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 TWNKQ96RR1 684 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 HNRNPABQ99729 332 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ZSWIM1Q9BR11 485 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ACBD6Q9BR61 282 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 MRPL45Q9BRJ2 306 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 TLR10Q9BXR5 811 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 UBXN6Q9BZV1 441 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 GOLGA2P5Q9HBQ8 144 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 PNPLA8Q9NP80 782 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 TBC1D13Q9NVG8 400 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 CNOT8Q9UFF9 292 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 HMGXB4Q9UGU5 601 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 PUF60Q9UHX1 559 aaKnown RBP9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 ATP11BQ9Y2G3 1177 aa9.61□□□□□ -0.87
NR1I3-230ENST00000511944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-230ENST00000511944 TCRBV5S1A1TA0A578 114 aa9.6□□□□□ -0.87
NR1I3-230ENST00000511944 TMCO5BA8MYB1 307 aa9.6□□□□□ -0.87
NR1I3-230ENST00000511944 M0QYV0 167 aa9.6□□□□□ -0.87
NR1I3-230ENST00000511944 BUB1O43683 1085 aa9.6□□□□□ -0.87
NR1I3-230ENST00000511944 BUB1BO60566 1050 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-230ENST00000511944 MICAL2O94851 1124 aa9.6□□□□□ -0.87
NR1I3-230ENST00000511944 SLU7O95391 586 aaKnown RBP9.6□□□□□ -0.87
NR1I3-230ENST00000511944 RHOQP17081 205 aa9.6□□□□□ -0.87
NR1I3-230ENST00000511944 RNASELQ05823 741 aaKnown RBP9.6□□□□□ -0.87
NR1I3-230ENST00000511944 SMARCB1Q12824 385 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms