RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 GANQ9H2C0 597 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
COL6A6-203ENST00000511332 FAM207AQ9NSI2 230 aaPredicted RBP13.62□□□□□ -0.23
COL6A6-203ENST00000511332 MAGED2Q9UNF1 606 aaPredicted RBP13.62□□□□□ -0.23
COL6A6-203ENST00000511332 FHOD1Q9Y613 1164 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 LOC730098B7Z3J9 87 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 O00370 1275 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 MED7O43513 233 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 TPM3P06753 285 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 HMGA1P17096 107 aaKnown RBP13.61□□□□□ -0.23
COL6A6-203ENST00000511332 SP100P23497 879 aaPredicted RBP13.61□□□□□ -0.23
COL6A6-203ENST00000511332 GABRR2P28476 465 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 USP8P40818 1118 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 MAP3K7CLP57077 242 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 FANCCQ00597 558 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 BST2Q10589 180 aaKnown RBP13.61□□□□□ -0.23
COL6A6-203ENST00000511332 MEA1Q16626 185 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 ARHGAP15Q53QZ3 475 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 DPY19L2P1Q6NXN4 242 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 NPAS3Q8IXF0 933 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 HS6ST3Q8IZP7 471 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 ANKRD52Q8NB46 1076 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 UHRF1Q96T88 793 aaPredicted RBP13.61□□□□□ -0.23
COL6A6-203ENST00000511332 SMOQ99835 787 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 TTLL2Q9BWV7 592 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 NAA15Q9BXJ9 866 aaKnown RBP13.61□□□□□ -0.23
COL6A6-203ENST00000511332 LRRC3Q9BY71 257 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 DUSP16Q9BY84 665 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 ZNF334Q9HCZ1 680 aaPredicted RBP13.61□□□□□ -0.23
COL6A6-203ENST00000511332 TMEM30AQ9NV96 361 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 GDE1Q9NZC3 331 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 EPS15L1Q9UBC2 864 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 ZMYM5Q9UJ78 669 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 AJAP1Q9UKB5 411 aaPredicted RBP13.61□□□□□ -0.23
COL6A6-203ENST00000511332 TSPAN16Q9UKR8 245 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 CDH7Q9ULB5 785 aa13.61□□□□□ -0.23
COL6A6-203ENST00000511332 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL6A6-203ENST00000511332 A0A1W2PQC6 194 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 A0A1W2PRU2 124 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 C19orf67A6NJJ6 358 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 C2CD4DB7Z1M9 353 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 F8VZ95 297 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 RNF225M0QZC1 329 aaPredicted RBP13.6□□□□□ -0.23
COL6A6-203ENST00000511332 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 CEBPBP17676 345 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 BRD2P25440 801 aaKnown RBP13.6□□□□□ -0.23
COL6A6-203ENST00000511332 DDX6P26196 483 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL6A6-203ENST00000511332 GNA15P30679 374 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 SSTR3P32745 418 aaPredicted RBP13.6□□□□□ -0.23
COL6A6-203ENST00000511332 CCR2P41597 374 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 KLK7P49862 253 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 SLC5A3P53794 718 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 POLR2FP61218 127 aaKnown RBP13.6□□□□□ -0.23
COL6A6-203ENST00000511332 MTMR3Q13615 1198 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 DRAP1Q14919 205 aaPredicted RBP13.6□□□□□ -0.23
COL6A6-203ENST00000511332 LCLAT1Q6UWP7 414 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 FAM71AQ8IYT1 594 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 ZDHHC14Q8IZN3 488 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 NUP93Q8N1F7 819 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 STKLD1Q8NE28 680 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 SHKBP1Q8TBC3 707 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 ING5Q8WYH8 240 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 FGF13Q92913 245 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 SLITRK1Q96PX8 696 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 SPAG5Q96R06 1193 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 KCNK16Q96T55 309 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 STK33Q9BYT3 514 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 GPR88Q9GZN0 384 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 FBXO44Q9H4M3 255 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 COMMD8Q9NX08 183 aa13.6□□□□□ -0.23
COL6A6-203ENST00000511332 KIF26AQ9ULI4 1882 aaPredicted RBP13.6□□□□□ -0.23
COL6A6-203ENST00000511332 M0QYV0 167 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 XPO1O14980 1071 aaKnown RBP13.59□□□□□ -0.23
COL6A6-203ENST00000511332 THAP12O43422 761 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 BEST1O76090 585 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 PPP3CCP48454 512 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 UBASH3AP57075 661 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 BPIFB4P59827 614 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 PTK2Q05397 1052 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 CNGA2Q16280 664 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 GAREM2Q75VX8 874 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 MTSS1LQ765P7 747 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 TTC30AQ86WT1 665 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 FMNL3Q8IVF7 1028 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 PDZD8Q8NEN9 1154 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 ZMIZ2Q8NF64 920 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 OVCA2Q8WZ82 227 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 MRPS31Q92665 395 aaKnown RBP13.59□□□□□ -0.23
COL6A6-203ENST00000511332 TCEAL4Q96EI5 215 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 MYADMQ96S97 322 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 ATXN3LQ9H3M9 355 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 SLITRK6Q9H5Y7 841 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 IL21Q9HBE4 155 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 NCANO14594 1321 aa13.59□□□□□ -0.23
COL6A6-203ENST00000511332 SOBPA7XYQ1 873 aa13.58□□□□□ -0.24
COL6A6-203ENST00000511332 FOXN3O00409 490 aaPredicted RBP13.58□□□□□ -0.24
COL6A6-203ENST00000511332 TNFRSF10BO14763 440 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms