RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 HOXD13P35453 343 aa24.42■■□□□ 1.5
SMAD5-207ENST00000511116 USP46P62068 366 aa24.42■■□□□ 1.5
SMAD5-207ENST00000511116 PSMC1P62191 440 aaKnown RBP24.42■■□□□ 1.5
SMAD5-207ENST00000511116 DUOXA2Q1HG44 320 aa24.42■■□□□ 1.5
SMAD5-207ENST00000511116 DENND5BQ6ZUT9 1274 aa24.42■■□□□ 1.5
SMAD5-207ENST00000511116 CBWD2Q8IUF1 395 aa24.42■■□□□ 1.5
SMAD5-207ENST00000511116 GLIS3Q8NEA6 775 aa24.42■■□□□ 1.5
SMAD5-207ENST00000511116 K7EQS6 105 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 DCLK1O15075 740 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 FAM163BP0C2L3 166 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 BDNFP23560 247 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 NOP14P78316 857 aaKnown RBP24.41■■□□□ 1.5
SMAD5-207ENST00000511116 SLC7A9P82251 487 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 TCEAL6Q6IPX3 200 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 C11orf74Q86VG3 221 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 WDR49Q8IV35 697 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 CCDC65Q8IXS2 484 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 MYCBPAPQ8TBZ2 947 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 TCEAL3Q969E4 200 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 USP28Q96RU2 1077 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 NME7Q9Y5B8 376 aa24.41■■□□□ 1.5
SMAD5-207ENST00000511116 ZNF840PA6NDX5 716 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 KCNK5O95279 499 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 TNNC2P02585 160 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 PPP3CCP48454 512 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 PMS2CLQ68D20 193 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 PCED1BQ96HM7 432 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 C8orf48Q96LL4 319 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 KIAA1586Q9HCI6 787 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 HSPBP1Q9NZL4 362 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 EHD2Q9NZN4 543 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 TRPM5Q9NZQ8 1165 aa24.4■■□□□ 1.5
SMAD5-207ENST00000511116 LEFTY2O00292 366 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 TACC1O75410 805 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 CAVIN2O95810 425 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 NASPP49321 788 aaPredicted RBP24.39■■□□□ 1.49
SMAD5-207ENST00000511116 CEBPZQ03701 1054 aaKnown RBP24.39■■□□□ 1.49
SMAD5-207ENST00000511116 E2F4Q16254 413 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 RNF43Q68DV7 783 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 CNNM4Q6P4Q7 775 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 STXBP4Q6ZWJ1 553 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 EPM2AIP1Q7L775 607 aaPredicted RBP24.39■■□□□ 1.49
SMAD5-207ENST00000511116 TSTD1Q8NFU3 115 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 CNOT6LQ96LI5 555 aaKnown RBP24.39■■□□□ 1.49
SMAD5-207ENST00000511116 PANK2Q9BZ23 570 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 TNMDQ9H2S6 317 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 KBTBD4Q9NVX7 518 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 MMP17Q9ULZ9 603 aa24.39■■□□□ 1.49
SMAD5-207ENST00000511116 TRIM66O15016 1216 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 EIF3DO15371 548 aaKnown RBP eCLIP24.38■■□□□ 1.49
SMAD5-207ENST00000511116 OAS1P00973 400 aaKnown RBP24.38■■□□□ 1.49
SMAD5-207ENST00000511116 CYP17A1P05093 508 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 GRIK1P39086 918 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 DGKEP52429 567 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 PSMD2Q13200 908 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 TRAPPC11Q7Z392 1133 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 ADGRG2Q8IZP9 1017 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 NOC3LQ8WTT2 800 aaKnown RBP24.38■■□□□ 1.49
SMAD5-207ENST00000511116 EDEM2Q9BV94 578 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 RNF38Q9H0F5 515 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 MTMR6Q9Y217 621 aa24.38■■□□□ 1.49
SMAD5-207ENST00000511116 R3HCC1Q9Y3T6 440 aaKnown RBP24.38■■□□□ 1.49
SMAD5-207ENST00000511116 TULP1O00294 542 aaPredicted RBP24.37■■□□□ 1.49
SMAD5-207ENST00000511116 PDGFRBP09619 1106 aa24.37■■□□□ 1.49
SMAD5-207ENST00000511116 EIF2DP41214 584 aaKnown RBP24.37■■□□□ 1.49
SMAD5-207ENST00000511116 CREB5Q02930 508 aa24.37■■□□□ 1.49
SMAD5-207ENST00000511116 USP39Q53GS9 565 aaKnown RBP24.37■■□□□ 1.49
SMAD5-207ENST00000511116 TTC16Q8NEE8 873 aa24.37■■□□□ 1.49
SMAD5-207ENST00000511116 OLIG1Q8TAK6 271 aa24.37■■□□□ 1.49
SMAD5-207ENST00000511116 HPS3Q969F9 1004 aa24.37■■□□□ 1.49
SMAD5-207ENST00000511116 CHAMP1Q96JM3 812 aa24.37■■□□□ 1.49
SMAD5-207ENST00000511116 MRPL45Q9BRJ2 306 aaKnown RBP24.37■■□□□ 1.49
SMAD5-207ENST00000511116 TRIM9Q9C026 710 aa24.37■■□□□ 1.49
SMAD5-207ENST00000511116 TMEM30AQ9NV96 361 aa24.37■■□□□ 1.49
SMAD5-207ENST00000511116 THADAQ6YHU6 1953 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 A0A0A0MRY4 1105 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 LNP1A1A4G5 178 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 ANTXRLA6NF34 631 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 F8VP50 259 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 STAU1O95793 577 aaKnown RBP24.36■■□□□ 1.49
SMAD5-207ENST00000511116 CST3P01034 146 aaPredicted RBP24.36■■□□□ 1.49
SMAD5-207ENST00000511116 KCNA4P22459 653 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 ANXA13P27216 316 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 MRPS21P82921 87 aaKnown RBP24.36■■□□□ 1.49
SMAD5-207ENST00000511116 CYP27A1Q02318 531 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 CRY1Q16526 586 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 ZNF507Q8TCN5 953 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 LRRC27Q9C0I9 530 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 GZF1Q9H116 711 aaPredicted RBP24.36■■□□□ 1.49
SMAD5-207ENST00000511116 CUEDC2Q9H467 287 aa24.36■■□□□ 1.49
SMAD5-207ENST00000511116 TGFB1I1O43294 461 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 GNL1P36915 607 aaPredicted RBP24.35■■□□□ 1.49
SMAD5-207ENST00000511116 CACNA2D1P54289 1103 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 PSMD6Q15008 389 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 DHCR24Q15392 516 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 SNRNP35Q16560 246 aaKnown RBP24.35■■□□□ 1.49
SMAD5-207ENST00000511116 HSF5Q4G112 596 aaPredicted RBP24.35■■□□□ 1.49
SMAD5-207ENST00000511116 C2orf27AQ580R0 203 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 MDH1BQ5I0G3 518 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 FILIP1Q7Z7B0 1213 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms