RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 SRGAP2O75044 1071 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 FGAP02671 866 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 DDX6P26196 483 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD1-206ENST00000511067 MST1P26927 711 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 ATICP31939 592 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 PPM1FP49593 454 aaPredicted RBP6.58□□□□□ -1.36
CHD1-206ENST00000511067 NSUN2Q08J23 767 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD1-206ENST00000511067 RESTQ13127 1097 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.58□□□□□ -1.36
CHD1-206ENST00000511067 RGS7BPQ6MZT1 257 aaPredicted RBP6.58□□□□□ -1.36
CHD1-206ENST00000511067 LDHAL6AQ6ZMR3 332 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 KCTD20Q7Z5Y7 419 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 SLC15A3Q8IY34 581 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 ATG16L2Q8NAA4 619 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 IPO4Q8TEX9 1081 aaKnown RBP6.58□□□□□ -1.36
CHD1-206ENST00000511067 DVL3Q92997 716 aaPredicted RBP6.58□□□□□ -1.36
CHD1-206ENST00000511067 PPP2R3CQ969Q6 453 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 EID2BQ96D98 161 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 ZDHHC12Q96GR4 267 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 TMOD4Q9NZQ9 345 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 DKK2Q9UBU2 259 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 ZMYND8Q9ULU4 1186 aaPredicted RBP6.58□□□□□ -1.36
CHD1-206ENST00000511067 DGKBQ9Y6T7 804 aa6.58□□□□□ -1.36
CHD1-206ENST00000511067 TRGV11A0A075B6L2 103 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 CCDC189A1A4V9 331 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 hCG_1984214I3L0E3 225 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 ACKR2O00590 384 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 RGS10O43665 173 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 FAM20BO75063 409 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 COQ9O75208 318 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 CSF1RP07333 972 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 PDE6CP51160 858 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 BCAT1P54687 386 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 KCNAB1Q14722 419 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 MANEALQ5VSG8 457 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 GGT6Q6P531 493 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 ZNF354CQ86Y25 554 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 GATAD2AQ86YP4 633 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 ZNF276Q8N554 614 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.57□□□□□ -1.36
CHD1-206ENST00000511067 CPEB3Q8NE35 698 aaKnown RBP6.57□□□□□ -1.36
CHD1-206ENST00000511067 IL17DQ8TAD2 202 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 TRIM63Q969Q1 353 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 FAM136AQ96C01 138 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 C8orf49Q96NF6 230 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 C1QTNF3Q9BXJ4 246 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 MAGEH1Q9H213 219 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 UNKLQ9H9P5 680 aaKnown RBP6.57□□□□□ -1.36
CHD1-206ENST00000511067 LRFN1Q9P244 771 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 IGSF9Q9P2J2 1179 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 DNAJB11Q9UBS4 358 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 HPSEQ9Y251 543 aa6.57□□□□□ -1.36
CHD1-206ENST00000511067 MRPS17Q9Y2R5 130 aaKnown RBP6.57□□□□□ -1.36
CHD1-206ENST00000511067 OR2W5A6NFC9 320 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 TMEM200CA6NKL6 621 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 AQP12BA6NM10 295 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 NDUFA10O95299 355 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 HSD3B1P14060 373 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 VEGFAP15692 232 aaPredicted RBP6.56□□□□□ -1.36
CHD1-206ENST00000511067 NPPBP16860 134 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 LAG3P18627 525 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 RENBPP51606 427 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 POLE2P56282 527 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 CCNIQ14094 377 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 TRIM71Q2Q1W2 868 aaKnown RBP6.56□□□□□ -1.36
CHD1-206ENST00000511067 VPS53Q5VIR6 699 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 RAP1GAP2Q684P5 730 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 TANGO2Q6ICL3 276 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 USP49Q70CQ1 688 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 C1orf210Q8IVY1 113 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 DNAJB14Q8TBM8 379 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 SLC25A43Q8WUT9 341 aaPredicted RBP6.56□□□□□ -1.36
CHD1-206ENST00000511067 ADAM2Q99965 735 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 PAGR1Q9BTK6 254 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 KRTAP4-2Q9BYR5 136 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.56□□□□□ -1.36
CHD1-206ENST00000511067 SLC25A32Q9H2D1 315 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 SSX2IPQ9Y2D8 614 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 MAP3K2Q9Y2U5 619 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 DTNAQ9Y4J8 743 aa6.56□□□□□ -1.36
CHD1-206ENST00000511067 CCNT2O60583 730 aaKnown RBP6.55□□□□□ -1.36
CHD1-206ENST00000511067 SRGNP10124 158 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 GATA3P23771 443 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 PRKAR1BP31321 381 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 ITGA8P53708 1063 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 TIAL1Q01085 375 aaKnown RBP eCLIP6.55□□□□□ -1.36
CHD1-206ENST00000511067 BIRC3Q13489 604 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 TMTC4Q5T4D3 741 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 RFX8Q6ZV50 586 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 MBD3L2Q8NHZ7 208 aaPredicted RBP6.55□□□□□ -1.36
CHD1-206ENST00000511067 KATNAL1Q9BW62 490 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 AMBRA1Q9C0C7 1298 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 AS3MTQ9HBK9 375 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 GBA2Q9HCG7 927 aaPredicted RBP6.55□□□□□ -1.36
CHD1-206ENST00000511067 HELLSQ9NRZ9 838 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 GRHPRQ9UBQ7 328 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 VPS51Q9UID3 782 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 TSC22D4Q9Y3Q8 395 aa6.55□□□□□ -1.36
CHD1-206ENST00000511067 PIP5K1BO14986 540 aa6.54□□□□□ -1.36
CHD1-206ENST00000511067 NPHP1O15259 732 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms