RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	TMCO5B	A8MYB1	307 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	RFXAP	O00287	272 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	TGM5	O43548	720 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	CSPG5	O95196	566 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	HAPLN1	P10915	354 aa	Predicted RBP	12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	ELF1	P32519	619 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	DEK	P35659	375 aa	Known RBP	12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	GRIK1	P39086	918 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	RPL34	P49207	117 aa	Known RBP	12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	CDR1	P51861	262 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	CACNA2D1	P54289	1103 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	SNX16	P57768	344 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	RPL10A	P62906	217 aa	Known RBP	12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	KRT83	P78385	493 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	PDCL	Q13371	301 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	MGAT5B	Q3V5L5	792 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	PMF1	Q6P1K2	205 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	PIGZ	Q86VD9	579 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	ERICH1	Q86X53	443 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	TCEAL8	Q8IYN2	117 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	MSANTD4	Q8NCY6	345 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	KCTD13	Q8WZ19	329 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	TRIM44	Q96DX7	344 aa	Predicted RBP	12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	VCPIP1	Q96JH7	1222 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	HSFY1	Q96LI6	401 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	C8orf48	Q96LL4	319 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	CEP295NL	Q96MC4	621 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	KCNK16	Q96T55	309 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	SLC4A5	Q9BY07	1137 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	CRISPLD1	Q9H336	500 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	CYP4F11	Q9HBI6	524 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	LUC7L	Q9NQ29	371 aa	Known RBP	12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	TAS2R14	Q9NYV8	317 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	LMCD1	Q9NZU5	365 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	CYTH4	Q9UIA0	394 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	SLC27A5	Q9Y2P5	690 aa		12.63	□□□□□ -0.39
RACK1-223	ENST00000510199	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.63	□□□□□ -0.39	3e-23	■■□□□ 11.4
RACK1-223	ENST00000510199	PRRC2B	Q5JSZ5	2229 aa	Known RBP	12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	HHLA1	C9JL84	531 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199		F8VP50	259 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	TULP2	O00295	520 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	CLASP2	O75122	1294 aa	Known RBP	12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	SEC24A	O95486	1093 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	GLUD1	P00367	558 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	FTL	P02792	175 aa	Predicted RBP	12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	MMP8	P22894	467 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	MAGEA1	P43355	309 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	ACADSB	P45954	432 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	GABRB2	P47870	512 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	CLCN4	P51793	760 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	C1QBP	Q07021	282 aa	Known RBP	12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	PTPN20	Q4JDL3	420 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	TOGARAM2	Q6ZUX3	1019 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	RTL10	Q7L3V2	364 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	TMEM110	Q86TL2	294 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	SCN4B	Q8IWT1	228 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	MCOLN2	Q8IZK6	566 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	TTC9B	Q8N6N2	239 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	ACRBP	Q8NEB7	543 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	IPO4	Q8TEX9	1081 aa	Known RBP	12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	HDAC7	Q8WUI4	952 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	PPP2R3C	Q969Q6	453 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	PPP1R13B	Q96KQ4	1090 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	SPATA17	Q96L03	361 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	SEPT5	Q99719	369 aa	Predicted RBP	12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	MIS12	Q9H081	205 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	TTYH1	Q9H313	450 aa	Predicted RBP	12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	ADAM22	Q9P0K1	906 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	FBXW11	Q9UKB1	542 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	INTU	Q9ULD6	942 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	PCDHA13	Q9Y5I0	950 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	ADGRG1	Q9Y653	693 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	NOTCH4	Q99466	2003 aa		12.62	□□□□□ -0.39
RACK1-223	ENST00000510199	ANKRD62	A6NC57	917 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	PRRG1	O14668	218 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	CALB1	P05937	261 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	H2AFZ	P0C0S5	128 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	RGS7	P49802	495 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	GALC	P54803	685 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	PTP4A2	Q12974	167 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	DUSP6	Q16828	381 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	DDR2	Q16832	855 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	RAB41	Q5JT25	222 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	CCDC149	Q6ZUS6	474 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	H2AFV	Q71UI9	128 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	MON1B	Q7L1V2	547 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	ADGRD2	Q7Z7M1	963 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	TXLNB	Q8N3L3	684 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	KREMEN2	Q8NCW0	462 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	SLC22A17	Q8WUG5	538 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	C18orf8	Q96DM3	657 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	TRIM11	Q96F44	468 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	CPXM1	Q96SM3	734 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	CDCA3	Q99618	268 aa	Predicted RBP	12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	C11orf70	Q9BRQ4	267 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	DESI2	Q9BSY9	194 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	PLEKHA4	Q9H4M7	779 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	SYNC	Q9H7C4	482 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	TLE6	Q9H808	572 aa		12.61	□□□□□ -0.39
RACK1-223	ENST00000510199	LRRC4	Q9HBW1	653 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms