RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SAMSN1Q9NSI8 373 aaKnown RBP14.41□□□□□ -0.1
SNF8-206ENST00000509989 AJAP1Q9UKB5 411 aaPredicted RBP14.41□□□□□ -0.1
SNF8-206ENST00000509989 F5P12259 2224 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 STX10O60499 249 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 AP1G2O75843 785 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 P4HA1P13674 534 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 ACO1P21399 889 aaKnown RBP14.4□□□□□ -0.1
SNF8-206ENST00000509989 CDC25CP30307 473 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 GDI1P31150 447 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 MAP3K7CLP57077 242 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 CUL2Q13617 745 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 MAPRE1Q15691 268 aaKnown RBP14.4□□□□□ -0.1
SNF8-206ENST00000509989 PHLDB3Q6NSJ2 640 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 CLEC20AQ6ZU45 233 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 DENND5BQ6ZUT9 1274 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 RRAGAQ7L523 313 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 UNC93AQ86WB7 457 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 FBXL6Q8N531 539 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 ARL14EPQ8N8R7 260 aaPredicted RBP14.4□□□□□ -0.1
SNF8-206ENST00000509989 FLCNQ8NFG4 579 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 USP13Q92995 863 aaPredicted RBP14.4□□□□□ -0.1
SNF8-206ENST00000509989 NXPE3Q969Y0 559 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 CYFIP2Q96F07 1278 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 KREMEN1Q96MU8 473 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 CRACR2AQ9BSW2 395 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 NT5C1AQ9BXI3 368 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 FOXQ1Q9C009 403 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 TRPV4Q9HBA0 871 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 TRPC7Q9HCX4 862 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 HEBP1Q9NRV9 189 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 GCNT4Q9P109 453 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 FBXL21Q9UKT6 434 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 MTF2Q9Y483 593 aaPredicted RBP14.4□□□□□ -0.1
SNF8-206ENST00000509989 MUC6Q6W4X9 2439 aa14.4□□□□□ -0.1
SNF8-206ENST00000509989 TULP2O00295 520 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 ARNTLO00327 626 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 SCAMP3O14828 347 aaKnown RBP14.39□□□□□ -0.11
SNF8-206ENST00000509989 AFPP02771 609 aaKnown RBP14.39□□□□□ -0.11
SNF8-206ENST00000509989 SLC9A1P19634 815 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 SOX9P48436 509 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 TAF10Q12962 218 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 WDR44Q5JSH3 913 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 CMTM8Q8IZV2 173 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 EHBP1Q8NDI1 1231 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 TFAP2BQ92481 460 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 TNIP3Q96KP6 325 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 HNRNPABQ99729 332 aaKnown RBP14.39□□□□□ -0.11
SNF8-206ENST00000509989 TTLL2Q9BWV7 592 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 RNF38Q9H0F5 515 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 INTS2Q9H0H0 1204 aaKnown RBP14.39□□□□□ -0.11
SNF8-206ENST00000509989 CSNK1G1Q9HCP0 422 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 WNT16Q9UBV4 365 aa14.39□□□□□ -0.11
SNF8-206ENST00000509989 CHORDC1Q9UHD1 332 aaPredicted RBP14.39□□□□□ -0.11
SNF8-206ENST00000509989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNF8-206ENST00000509989 TRIM66O15016 1216 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 PSMC3P17980 439 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 ANXA13P27216 316 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 AVPR2P30518 371 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 SLC5A3P53794 718 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 TNK2Q07912 1038 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 SLC44A4Q53GD3 710 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 ARHGAP15Q53QZ3 475 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 MIIPQ5JXC2 388 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 TRIM68Q6AZZ1 485 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 DPY19L2P1Q6NXN4 242 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 MON1AQ86VX9 555 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 TTC30AQ86WT1 665 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 MFSD6LQ8IWD5 586 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 TTC16Q8NEE8 873 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 WBP2Q969T9 261 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 SMARCD1Q96GM5 515 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 TMEM176AQ96HP8 235 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 HEXIM2Q96MH2 286 aaKnown RBP14.38□□□□□ -0.11
SNF8-206ENST00000509989 TRMT61BQ9BVS5 477 aaKnown RBP14.38□□□□□ -0.11
SNF8-206ENST00000509989 TBC1D17Q9HA65 648 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 ACP6Q9NPH0 428 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 ARHGEF3Q9NR81 526 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 CACNA1IQ9P0X4 2223 aa14.38□□□□□ -0.11
SNF8-206ENST00000509989 ZNF840PA6NDX5 716 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 OTOL1A6NHN0 477 aaPredicted RBP14.37□□□□□ -0.11
SNF8-206ENST00000509989 PMM2O15305 246 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 CCDC192P0DO97 292 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 GLULP15104 373 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 NAIF1Q69YI7 327 aaPredicted RBP14.37□□□□□ -0.11
SNF8-206ENST00000509989 NUP93Q8N1F7 819 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 PPM1KQ8N3J5 372 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 CCDC150Q8NCX0 1101 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 PRSS33Q8NF86 280 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 NDRG1Q92597 394 aaKnown RBP14.37□□□□□ -0.11
SNF8-206ENST00000509989 MRPS31Q92665 395 aaKnown RBP14.37□□□□□ -0.11
SNF8-206ENST00000509989 CHFRQ96EP1 664 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 GPR88Q9GZN0 384 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 BRD9Q9H8M2 597 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 NMUR1Q9HB89 426 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 SIX2Q9NPC8 291 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 DMAP1Q9NPF5 467 aaPredicted RBP14.37□□□□□ -0.11
SNF8-206ENST00000509989 OSER1Q9NX31 292 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 IL37Q9NZH6 218 aa14.37□□□□□ -0.11
SNF8-206ENST00000509989 GMIPQ9P107 970 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms