RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ZDHHC4Q9NPG8 344 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 UXTQ9UBK9 157 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-202ENST00000509637 RALYQ9UKM9 306 aaKnown RBP17.03■□□□□ 0.32
RAB40C-202ENST00000509637 ZNF840PA6NDX5 716 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 LEFTY2O00292 366 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 CLDN5O00501 218 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 KCNK5O95279 499 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 TOP3BO95985 862 aaKnown RBP17.02■□□□□ 0.32
RAB40C-202ENST00000509637 CYP17A1P05093 508 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 WARSP23381 471 aaKnown RBP17.02■□□□□ 0.32
RAB40C-202ENST00000509637 CASP1P29466 404 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 SEC13P55735 322 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 PSMD2Q13200 908 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 FBXO43Q4G163 708 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 EPM2AIP1Q7L775 607 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-202ENST00000509637 TRAPPC11Q7Z392 1133 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 ADGRG2Q8IZP9 1017 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 CCDC33Q8N5R6 958 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 C12orf50Q8NA57 414 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-202ENST00000509637 PLEKHO2Q8TD55 490 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 MAGEC2Q9UBF1 373 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-202ENST00000509637 HCN2Q9UL51 889 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 WASF3Q9UPY6 502 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 PCDHGA5Q9Y5G8 931 aa17.02■□□□□ 0.32
RAB40C-202ENST00000509637 F8VP50 259 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 APBB3O95704 486 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 OLFM2O95897 454 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 TMEM191BP0C7N4 346 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 PCSK1P29120 753 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 STAT6P42226 847 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 PGFP49763 221 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 C2orf27AQ580R0 203 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 IL31Q6EBC2 164 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 DPH6Q7L8W6 267 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 RASSF3Q86WH2 238 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 RDH13Q8NBN7 331 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 ATP2A3Q93084 1043 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 ZNF518BQ9C0D4 1074 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 KBTBD4Q9NVX7 518 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 SMPD4Q9NXE4 827 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 HSPBP1Q9NZL4 362 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 MORC2Q9Y6X9 1032 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-202ENST00000509637 CFAP47Q6ZTR5 3102 aa17.01■□□□□ 0.31
RAB40C-202ENST00000509637 ZNF233A6NK53 670 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 C4orf47A7E2U8 309 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 CDX4O14627 284 aaPredicted RBP17■□□□□ 0.31
RAB40C-202ENST00000509637 CLIC2O15247 247 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 GRIK1P39086 918 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 DGKEP52429 567 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 SLC7A9P82251 487 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 SHC2P98077 582 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 CREB5Q02930 508 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 MDH1BQ5I0G3 518 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 PAQR9Q6ZVX9 377 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 FILIP1Q7Z7B0 1213 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 PHTF2Q8N3S3 785 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 MDGA1Q8NFP4 955 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 MYCBPAPQ8TBZ2 947 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 RLN3Q8WXF3 142 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 ANKRD36BP1Q96IX9 119 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 ZFRQ96KR1 1074 aaKnown RBP17■□□□□ 0.31
RAB40C-202ENST00000509637 B3GNT5Q9BYG0 378 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 VPS45Q9NRW7 570 aa17■□□□□ 0.31
RAB40C-202ENST00000509637 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
RAB40C-202ENST00000509637 ASCC3Q8N3C0 2202 aaKnown RBP17■□□□□ 0.31
RAB40C-202ENST00000509637 ZFHX4Q86UP3 3567 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 FRYQ5TBA9 3013 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 LNP1A1A4G5 178 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 FOXD2O60548 495 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-202ENST00000509637 CAVIN2O95810 425 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 OAS1P00973 400 aaKnown RBP16.99■□□□□ 0.31
RAB40C-202ENST00000509637 NASPP49321 788 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-202ENST00000509637 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 EHHADHQ08426 723 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 TAF10Q12962 218 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 ALCAMQ13740 583 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 KCNB1Q14721 858 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 DHCR24Q15392 516 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 DUOXA2Q1HG44 320 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 PMS2CLQ68D20 193 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 RNF43Q68DV7 783 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 VSTM1Q6UX27 236 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 DENND5BQ6ZUT9 1274 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 LINC00301Q8NCQ3 95 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 OLIG1Q8TAK6 271 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 ZNF507Q8TCN5 953 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 TRIM9Q9C026 710 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 SDCBP2Q9H190 292 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 XYLT2Q9H1B5 865 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 CPQQ9Y646 472 aa16.99■□□□□ 0.31
RAB40C-202ENST00000509637 SGK1O00141 431 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 ADAM23O75077 832 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 PTPN1P18031 435 aaKnown RBP16.98■□□□□ 0.31
RAB40C-202ENST00000509637 SPINK2P20155 84 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 KIR2DL1P43626 348 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-202ENST00000509637 CDH8P55286 799 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms