RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 TCF3P15923 654 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 CMA1P23946 247 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 GJA4P35212 333 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 MYL6P60660 151 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 CLDN10P78369 228 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 ZNF77Q15935 545 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 MDH1BQ5I0G3 518 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 TDRD10Q5VZ19 366 aaKnown RBP13.47□□□□□ -0.25
KDM3B-206ENST00000509468 HEATR6Q6AI08 1181 aaKnown RBP13.47□□□□□ -0.25
KDM3B-206ENST00000509468 FSTL4Q6MZW2 842 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 SLC22A12Q96S37 553 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 P2RY13Q9BPV8 354 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 ELOVL4Q9GZR5 314 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 USP18Q9UMW8 372 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 ARHGAP26Q9UNA1 814 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 OTOGLQ3ZCN5 2332 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 RALGAPA1Q6GYQ0 2036 aa13.47□□□□□ -0.25
KDM3B-206ENST00000509468 C2orf78A6NCI8 922 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 ZNF840PA6NDX5 716 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 PDXKO00764 312 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 FOXD2O60548 495 aaPredicted RBP13.46□□□□□ -0.25
KDM3B-206ENST00000509468 P4HA1P13674 534 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 ARSAP15289 507 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 STK4Q13043 487 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 CCDC142Q17RM4 750 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 CEP68Q76N32 757 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 WDR5BQ86VZ2 330 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 SLC9A9Q8IVB4 645 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 TTC16Q8NEE8 873 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 SH3RF2Q8TEC5 729 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 PARD3BQ8TEW8 1205 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 CD101Q93033 1021 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.25
KDM3B-206ENST00000509468 SLITRK1Q96PX8 696 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 TTLL2Q9BWV7 592 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 XYLT2Q9H1B5 865 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 VRTNQ9H8Y1 702 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 EXOC1Q9NV70 894 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 DMAC2Q9NW81 257 aa13.46□□□□□ -0.25
KDM3B-206ENST00000509468 HELZP42694 1942 aaKnown RBP13.46□□□□□ -0.25
KDM3B-206ENST00000509468 ATP8B3O60423 1300 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 F8VP50 259 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 SLC9A3R1O14745 358 aaPredicted RBP13.45□□□□□ -0.26
KDM3B-206ENST00000509468 KLRC4O43908 158 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 RTN3O95197 1032 aaPredicted RBP13.45□□□□□ -0.26
KDM3B-206ENST00000509468 KIF20AO95235 890 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 NFATC1O95644 943 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 ABL1P00519 1130 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 EGFP01133 1207 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 C4BPAP04003 597 aaKnown RBP13.45□□□□□ -0.26
KDM3B-206ENST00000509468 RPN1P04843 607 aaKnown RBP13.45□□□□□ -0.26
KDM3B-206ENST00000509468 TGM1P22735 817 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 USP46P62068 366 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 SLC7A9P82251 487 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 DMWDQ09019 674 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 SPEM2Q0P670 501 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 BIRC3Q13489 604 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 PKP1Q13835 747 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 LPAL2Q16609 132 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 EML3Q32P44 896 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 KMT5BQ4FZB7 885 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 ZNF667Q5HYK9 610 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
KDM3B-206ENST00000509468 NUP93Q8N1F7 819 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 B3GALNT2Q8NCR0 500 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 TNIP3Q96KP6 325 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 B3GNT5Q9BYG0 378 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 LINC00597Q9H2U6 94 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 FBRSL1Q9HCM7 1045 aaKnown RBP13.45□□□□□ -0.26
KDM3B-206ENST00000509468 C2orf42Q9NWW7 574 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 CDV3Q9UKY7 258 aaKnown RBP13.45□□□□□ -0.26
KDM3B-206ENST00000509468 WNT6Q9Y6F9 365 aa13.45□□□□□ -0.26
KDM3B-206ENST00000509468 ATG2BQ96BY7 2078 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 A0A1B0GVL5 298 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 IKBKBO14920 756 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 ACTN4O43707 911 aaKnown RBP13.44□□□□□ -0.26
KDM3B-206ENST00000509468 CALUO43852 315 aaPredicted RBP13.44□□□□□ -0.26
KDM3B-206ENST00000509468 RNF40O75150 1001 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 CLSTN1O94985 981 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 TRIM21P19474 475 aaKnown RBP13.44□□□□□ -0.26
KDM3B-206ENST00000509468 YWHAQP27348 245 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 CASP4P49662 377 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 CDH8P55286 799 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 KRT85P78386 507 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 TAF10Q12962 218 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 USP4Q13107 963 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 NCOA4Q13772 614 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 CSRP2Q16527 193 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 ZNF699Q32M78 642 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 CACNA2D4Q7Z3S7 1137 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 GRAMD1CQ8IYS0 662 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 ADGRG2Q8IZP9 1017 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 PDZD8Q8NEN9 1154 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 RIN3Q8TB24 985 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 OVCA2Q8WZ82 227 aa13.44□□□□□ -0.26
KDM3B-206ENST00000509468 TAF4BQ92750 862 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms