RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 FNTBP49356 437 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 MARSP56192 900 aaKnown RBP15.61■□□□□ 0.09
HMGCL-208ENST00000509389 LPAL2Q16609 132 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 INTS6LQ5JSJ4 861 aaKnown RBP15.61■□□□□ 0.09
HMGCL-208ENST00000509389 SDHAF4Q5VUM1 108 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 STXBP4Q6ZWJ1 553 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 OSTM1Q86WC4 334 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 C12orf56Q8IXR9 622 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 TMEM86AQ8N2M4 240 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 GPD1LQ8N335 351 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 USP13Q92995 863 aaPredicted RBP15.61■□□□□ 0.09
HMGCL-208ENST00000509389 PKMYT1Q99640 499 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 PARD6AQ9NPB6 346 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 INTS13Q9NVM9 706 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 C2orf42Q9NWW7 574 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 GDAP2Q9NXN4 497 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 SIX4Q9UIU6 781 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 GMEB2Q9UKD1 530 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 GTF3C4Q9UKN8 822 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 RAB23Q9ULC3 237 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 MAGED2Q9UNF1 606 aaPredicted RBP15.61■□□□□ 0.09
HMGCL-208ENST00000509389 CCL26Q9Y258 94 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 SNX9Q9Y5X1 595 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 A0A1B0GTH6 734 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 HRO43593 1189 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 CYP2F1P24903 491 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 DDX6P26196 483 aaKnown RBP eCLIP15.6■□□□□ 0.09
HMGCL-208ENST00000509389 AVPR1AP37288 418 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 RBP5P82980 135 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 MYL7Q01449 175 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 CCINQ13939 588 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 DDR2Q16832 855 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 CCDC142Q17RM4 750 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 TCP11X2Q5H9J9 407 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 LMBRD2Q68DH5 695 aaPredicted RBP15.6■□□□□ 0.09
HMGCL-208ENST00000509389 TXNDC8Q6A555 127 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 MRPS31Q92665 395 aaKnown RBP15.6■□□□□ 0.09
HMGCL-208ENST00000509389 ANP32BQ92688 251 aaKnown RBP15.6■□□□□ 0.09
HMGCL-208ENST00000509389 CEP63Q96MT8 703 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 FAM83CQ9BQN1 747 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 MTMR12Q9C0I1 747 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 ABCB6Q9NP58 842 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 USP18Q9UMW8 372 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 NCOR2Q9Y618 2525 aa15.6■□□□□ 0.09
HMGCL-208ENST00000509389 ATG2BQ96BY7 2078 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 PTPRJQ12913 1337 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 SOBPA7XYQ1 873 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 GABRDO14764 452 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 HCRTO43612 131 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 TMEM191BP0C7N4 346 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 RPL10AP62906 217 aaKnown RBP15.59■□□□□ 0.09
HMGCL-208ENST00000509389 SRSF5Q13243 272 aaKnown RBP15.59■□□□□ 0.09
HMGCL-208ENST00000509389 SIM2Q14190 667 aaPredicted RBP15.59■□□□□ 0.09
HMGCL-208ENST00000509389 TRIM68Q6AZZ1 485 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 LAIR1Q6GTX8 287 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 PRR23BQ6ZRT6 265 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 MON1AQ86VX9 555 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 LONP2Q86WA8 852 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 SLC9A9Q8IVB4 645 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 ADGRF2Q8IZF7 708 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 SYNPOQ8N3V7 929 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 TOP6BLQ8N6T0 577 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 OR5B17Q8NGF7 314 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 RIN3Q8TB24 985 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 SPATA18Q8TC71 538 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 TSG101Q99816 390 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 XPO4Q9C0E2 1151 aaKnown RBP15.59■□□□□ 0.09
HMGCL-208ENST00000509389 KIF9Q9HAQ2 790 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 HPS4Q9NQG7 708 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 TDP1Q9NUW8 608 aa15.59■□□□□ 0.09
HMGCL-208ENST00000509389 OTOL1A6NHN0 477 aaPredicted RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 PRR5-ARHGAP8B1AHC4 643 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 KIAA0391O15091 583 aaKnown RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 TADA3O75528 432 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 NOL4O94818 638 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 HOXC13P31276 330 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 PBX1P40424 430 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 LHX1P48742 406 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 MCCD1P59942 119 aaPredicted RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 SNRPFP62306 86 aaKnown RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 ARHGAP8P85298 464 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 FKBP3Q00688 224 aaKnown RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 LMNB2Q03252 620 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 SPEM2Q0P670 501 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 RUNX3Q13761 415 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 KRT31Q15323 416 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 SOWAHAQ2M3V2 549 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 HEATR6Q6AI08 1181 aaKnown RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 FAM114A1Q8IWE2 563 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 NELFCDQ8IXH7 590 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 CHFRQ96EP1 664 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 TRMT2BQ96GJ1 504 aaKnown RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 ANKRD36BP1Q96IX9 119 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 MYRFLQ96LU7 910 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 SRRTQ9BXP5 876 aaKnown RBP15.58■□□□□ 0.08
HMGCL-208ENST00000509389 TRIM5Q9C035 493 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 EBF3Q9H4W6 596 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 DMAC2Q9NW81 257 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 IFNKQ9P0W0 207 aa15.58■□□□□ 0.08
HMGCL-208ENST00000509389 CGNQ9P2M7 1197 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms