RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 CD19P15391 556 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 NQO1P15559 274 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 EIF4BP23588 611 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 GRM5P41594 1212 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 RAD23BP54727 409 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 COPS2P61201 443 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 RPL7AP62424 266 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 PURAQ00577 322 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 PPARDQ03181 441 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 BNIP1Q12981 228 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 SNX1Q13596 522 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 KYNUQ16719 465 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 GLRA4Q5JXX5 417 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 NUGGCQ68CJ6 796 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 PLEKHA7Q6IQ23 1121 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 CEP57Q86XR8 500 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 TDRPQ86YL5 185 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 WDTC1Q8N5D0 677 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 TRIB2Q92519 343 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 HPDLQ96IR7 371 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 RBM41Q96IZ5 413 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 ZMAT2Q96NC0 199 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 DPP3Q9NY33 737 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 IP6K2Q9UHH9 426 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 GABRQQ9UN88 632 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 C2CD2Q9Y426 696 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 AKR1A1P14550 325 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 CHKAP35790 457 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 RASA2Q15283 850 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 KYAT1Q16773 422 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 CCDC38Q502W7 563 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 CYP4A22Q5TCH4 519 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 LRRC38Q5VT99 294 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 NOTUMQ6P988 496 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 ANKS1BQ7Z6G8 1248 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 FAM228AQ86W67 206 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 ZCCHC9Q8N567 271 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 OSBPL8Q9BZF1 889 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 CXorf56Q9H5V9 222 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 PARVAQ9NVD7 372 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 PRKAG3Q9UGI9 489 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 NAALADL1Q9UQQ1 740 aa11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 PIN4Q9Y237 131 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 DRG1Q9Y295 367 aaKnown RBP11.57□□□□□ -0.56
SH3RF1-203ENST00000508685 PPEF2O14830 753 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 TLR3O15455 904 aaKnown RBP11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 TJP3O95049 919 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 LSM8O95777 96 aaKnown RBP11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 PGK1P00558 417 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 RALAP11233 206 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 AKAP5P24588 427 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 PSMC4P43686 418 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 CAP1Q01518 475 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 SNX17Q15036 470 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 MTFR1Q15390 333 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 TRIP11Q15643 1979 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 DCAF4L1Q3SXM0 396 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 IZUMO3Q5VZ72 239 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 DENND1BQ6P3S1 775 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 C7orf31Q8N865 590 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 SLC4A11Q8NBS3 891 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 TMEM35BQ8NCS4 154 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 APOL6Q9BWW8 343 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 TRIM6Q9C030 488 aaPredicted RBP11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 ELOVL4Q9GZR5 314 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 TJP2Q9UDY2 1190 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 TUBGCP4Q9UGJ1 667 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 BAIAP2L1Q9UHR4 511 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 CYTH4Q9UIA0 394 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 ITGA11Q9UKX5 1188 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 PCDHGC3Q9UN70 934 aa11.56□□□□□ -0.56
SH3RF1-203ENST00000508685 C17orf102A2RUQ5 167 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 FAM47DPA6NHR8 397 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 CILPO75339 1184 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 UBOX5O94941 541 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 ALADP13716 330 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 CCND1P24385 295 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 ATICP31939 592 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 YWHAEP62258 255 aaKnown RBP11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 TAP1Q03518 808 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 TRIM32Q13049 653 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 FAM133BQ5BKY9 247 aaKnown RBP11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 COL13A1Q5TAT6 717 aaPredicted RBP11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 RGS9BPQ6ZS82 235 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 C18orf25Q96B23 403 aaPredicted RBP11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 SNX27Q96L92 541 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 MCEEQ96PE7 176 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 TGS1Q96RS0 853 aaKnown RBP11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 PHACTR1Q9C0D0 580 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 ECT2Q9H8V3 914 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 VRTNQ9H8Y1 702 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 Q9Y3F1 56 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 RECQL4O94761 1208 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 CYBAP13498 195 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 TCF4P15884 667 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 KCNA4P22459 653 aa11.55□□□□□ -0.56
SH3RF1-203ENST00000508685 KLRC2P26717 231 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms