RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 RPS6KC1Q96S38 1066 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 APOL5Q9BWW9 433 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ZMYND12Q9H0C1 365 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 BCAS3Q9H6U6 928 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 AGO3Q9H9G7 860 aaKnown RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ERVK-5Q9HDB9 667 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 MRPL17Q9NRX2 175 aaKnown RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 PDRG1Q9NUG6 133 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 SUCLA2Q9P2R7 463 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 GULP1Q9UBP9 304 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 DDX25Q9UHL0 483 aaKnown RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 RAPGEFL1Q9UHV5 662 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 BARX2Q9UMQ3 279 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 USP15Q9Y4E8 981 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 COL6A3P12111 3177 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 FAM86B1E9PN63 330 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 INO80B-WBP1J3KQ70 363 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ARNTLO00327 626 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ASAP2O43150 1006 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 NPHS1O60500 1241 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 C22orf31O95567 290 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 FAM86B2P0C5J1 330 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 SRGAP2CP0DJJ0 459 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 LCP1P13796 627 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 DARSP14868 501 aaKnown RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 GCFC2P16383 781 aaKnown RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 SDHBP21912 280 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 RPS6KB1P23443 525 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 OR1G1P47890 313 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 QARSP47897 775 aaKnown RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 MRE11P49959 708 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 AK2P54819 239 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ADAM17P78536 824 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ZXDAP98168 799 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 CYP4F8P98187 520 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 MVKQ03426 396 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 KCNAB2Q13303 367 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ITGB3BPQ13352 177 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 MXD4Q14582 209 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 PCBP1Q15365 356 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 PTPN21Q16825 1174 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 DUSP6Q16828 381 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 TCTN1Q2MV58 587 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 XKR9Q5GH70 373 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 HERC4Q5GLZ8 1057 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 NOMO2Q5JPE7 1267 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 MARCH8Q5T0T0 291 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 RARS2Q5T160 578 aaKnown RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ADGRF1Q5T601 910 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ACBD5Q5T8D3 534 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 FAM102BQ5T8I3 360 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 LIN9Q5TKA1 542 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 E4F1Q66K89 784 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 NCAPH2Q6IBW4 605 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 IQCEQ6IPM2 695 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ANKRD54Q6NXT1 300 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 CCDC149Q6ZUS6 474 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 RUFY3Q7L099 469 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 NEK8Q86SG6 692 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ECHDC2Q86YB7 292 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 CCDC60Q8IWA6 550 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ZBTB8OSQ8IWT0 167 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 TPH2Q8IWU9 490 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 SCUBE1Q8IWY4 988 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 BLIDQ8IZY5 108 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 VPS52Q8N1B4 723 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 LRRC71Q8N4P6 559 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 FAM184AQ8NB25 1140 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ZSWIM2Q8NEG5 633 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 CYP2W1Q8TAV3 490 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 TBCKQ8TEA7 893 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 USP33Q8TEY7 942 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 SECISBP2LQ93073 1101 aaKnown RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ZNF689Q96CS4 500 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ZBTB10Q96DT7 871 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 INTS4Q96HW7 963 aaKnown RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 CHAMP1Q96JM3 812 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ADPGKQ9BRR6 497 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 PHF20Q9BVI0 1012 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 COLEC11Q9BWP8 271 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 RAB34Q9BZG1 259 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 IL25Q9H293 177 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 SFXN1Q9H9B4 322 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 MARCH2Q9P0N8 246 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 VPS54Q9P1Q0 977 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 ACSL6Q9UKU0 697 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 SORCS3Q9UPU3 1222 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 FAN1Q9Y2M0 1017 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 KIF3AQ9Y496 699 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 CNTNAP2Q9UHC6 1331 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 SIP14410 1827 aa4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 COL4A4P53420 1690 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P11-201ENST00000508668 LCTP09848 1927 aa4.15□□□□□ -1.74
HMGN1P11-201ENST00000508668 A0A087WZ62 844 aa4.15□□□□□ -1.75
HMGN1P11-201ENST00000508668 A0A0U1RQF3 1178 aa4.15□□□□□ -1.75
HMGN1P11-201ENST00000508668 ZNF503-AS2A6NEH8 195 aa4.15□□□□□ -1.75
HMGN1P11-201ENST00000508668 MSH4O15457 936 aa4.15□□□□□ -1.75
HMGN1P11-201ENST00000508668 LINC01565O15544 149 aa4.15□□□□□ -1.75
HMGN1P11-201ENST00000508668 TRAPPC3O43617 180 aa4.15□□□□□ -1.75
HMGN1P11-201ENST00000508668 TBX10O75333 385 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms