RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 CLDN5O00501 218 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 LRRN2O75325 713 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 SOAT2O75908 522 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 CCDC172P0C7W6 258 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 LAMP2P13473 410 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 UCHL3P15374 230 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 ACO1P21399 889 aaKnown RBP9.67□□□□□ -0.86
NUP54-207ENST00000508583 YWHAQP27348 245 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 GABRR2P28476 465 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 ADORA2BP29275 332 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 CDR1P51861 262 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 MAP3K7CLP57077 242 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 SNX16P57768 344 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 ZNF445P59923 1031 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 BST2Q10589 180 aaKnown RBP9.67□□□□□ -0.86
NUP54-207ENST00000508583 ORC1Q13415 861 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 RAPGEF1Q13905 1077 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 ARHGAP44Q17R89 818 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 PRSS36Q5K4E3 855 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 KLHDC7AQ5VTJ3 777 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 LUZP1Q86V48 1076 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 TMC8Q8IU68 726 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 ARHGEF19Q8IW93 802 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 NPAS3Q8IXF0 933 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 UBR7Q8N806 425 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 ANKRD52Q8NB46 1076 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 STKLD1Q8NE28 680 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 NEK11Q8NG66 645 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 SHC3Q92529 594 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 FGF13Q92913 245 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 IQCDQ96DY2 449 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 SPAG5Q96R06 1193 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 ERGIC2Q96RQ1 377 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 TWNKQ96RR1 684 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 TTLL2Q9BWV7 592 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 LSM14BQ9BX40 385 aaKnown RBP9.67□□□□□ -0.86
NUP54-207ENST00000508583 UBXN6Q9BZV1 441 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 ATXN3LQ9H3M9 355 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 TRPM5Q9NZQ8 1165 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 DNAJC12Q9UKB3 198 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 CEP83Q9Y592 693 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 NME7Q9Y5B8 376 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 A0A0C4DFX4 3053 aa9.67□□□□□ -0.86
NUP54-207ENST00000508583 A0A1W2PQC6 194 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 A0A1W2PRU2 124 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 CBFA2T2O43439 604 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 ATP1A3P13637 1013 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 SP100P23497 879 aaPredicted RBP9.66□□□□□ -0.86
NUP54-207ENST00000508583 WEE1P30291 646 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 GNA15P30679 374 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 USP8P40818 1118 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 ZNF132P52740 706 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 SLC5A3P53794 718 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 NTHL1P78549 312 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 SYCP1Q15431 976 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 CNGA2Q16280 664 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 CCDC142Q17RM4 750 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 GOLGA7BQ2TAP0 167 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 PPP1R26Q5T8A7 1209 aaPredicted RBP9.66□□□□□ -0.86
NUP54-207ENST00000508583 LCLAT1Q6UWP7 414 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 CLEC20AQ6ZU45 233 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 ARHGAP18Q8N392 663 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 ITFG1Q8TB96 612 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 FBXO32Q969P5 355 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 KREMEN1Q96MU8 473 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 NOX5Q96PH1 765 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 CDK5RAP1Q96SZ6 601 aaKnown RBP9.66□□□□□ -0.86
NUP54-207ENST00000508583 COL25A1Q9BXS0 654 aaPredicted RBP9.66□□□□□ -0.86
NUP54-207ENST00000508583 STK33Q9BYT3 514 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 HSD3B7Q9H2F3 369 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 TASP1Q9H6P5 420 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
NUP54-207ENST00000508583 TSPAN16Q9UKR8 245 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.66□□□□□ -0.86
NUP54-207ENST00000508583 DOCK8Q8NF50 2099 aa9.66□□□□□ -0.86
NUP54-207ENST00000508583 TRAV19A0A0A6YYK7 116 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 A0A1B0GTH6 734 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 O00370 1275 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 DPYSL4O14531 572 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 XPO1O14980 1071 aaKnown RBP9.65□□□□□ -0.86
NUP54-207ENST00000508583 THAP12O43422 761 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 ALADP13716 330 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 HMGA1P17096 107 aaKnown RBP9.65□□□□□ -0.86
NUP54-207ENST00000508583 CEBPBP17676 345 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 AVPR1AP37288 418 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 GPR15P49685 360 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 PSEN1P49768 467 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 TUBP50607 506 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 UBASH3AP57075 661 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 KCNMA1Q12791 1236 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 MTMR3Q13615 1198 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 DRAP1Q14919 205 aaPredicted RBP9.65□□□□□ -0.86
NUP54-207ENST00000508583 TEAD2Q15562 447 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 SLC5A9Q2M3M2 681 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 GPR158Q5T848 1215 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 SDHAF4Q5VUM1 108 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 PAQR9Q6ZVX9 377 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 GAREM2Q75VX8 874 aa9.65□□□□□ -0.86
NUP54-207ENST00000508583 CACNA2D4Q7Z3S7 1137 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms